Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun4g01356 ATGGCACCCAAACCACCTAGTACGGGTCTGTTTGTTGGATTGAACAAGGGTCACATTGTTACCAAGAAGGAATTGCCCCCACGGCCCTCCGATCGCAAAGGGAAAACCAGCAAAAGGGTGCACTTTGTGAGGAACCTCATCAGAGAGGTTGCTGGTTTTGCACCTTATGAAAAGCGTATAACTGAGTTACTCAAGGTTGGAAAGGATAAGAGGGCACTGAAGGTTGCGAAGAGAAAGCTTGGAACCCATAAACGCGCTAAGAAGAAGAGAGAAGAGATGTCCAATGTTCTCAGGAAGATGAGGTTGTTCTATGTTCTTTTGTCAACATTGTATTCAATACCCTATATATTTTATTAA 357 0.437 MAPKPPSTGLFVGLNKGHIVTKKELPPRPSDRKGKTSKRVHFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNVLRKMRLFYVLLSTLYSIPYIFY 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun4g01356 118 ProSitePatterns Ribosomal protein L36e signature. 55 65 IPR000509 GO:0003735|GO:0005840|GO:0006412
Viun4g01356 118 FunFam 60S ribosomal protein L36 1 104 - -
Viun4g01356 118 Pfam Ribosomal protein L36e 8 101 IPR000509 GO:0003735|GO:0005840|GO:0006412
Viun4g01356 118 Gene3D 60S ribosomal protein L36 2 103 IPR038097 -
Viun4g01356 118 PANTHER 60S RIBOSOMAL PROTEIN L36 1 101 IPR000509 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun4g01356 Viun-Chr4 21005677 21007492 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun4g01356 7 101 Cytoplasmic Ribosomal Protein Gene Family AT5G02450 86.316 2.78e-55 166
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun4g01356 K02920 - gmx:100785591 202.601