Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun4g01354 ATGGCACCCAAACCACCTAGTACGGGTCTGTTTGTTGGATTGAACAAGGGTCACATTGTTACCAAGAAGGAATTGCCCCCACGGCCCTCCGATCGCAAAGGGAAAACCAGCAAAAGGGTGCACTTTGTGAGGAACCTCATCAGAGAGGTTGCTGGTTTTGCACCTTATGAAAAGCGTATAACTGAGTTACTCAAGGTTGGAAAGGATAAGAGGGCACTGAAGGTTGCGAAGAGAAAGCTTGGAACCCATAAACGCGCTAAGAAGAAGAGAGAAGAGATGTCCAATGTTCTCAGGAAGATGAGGGCTGGTGGAGCTGGAGACAAGAAGAAATAG 333 0.4775 MAPKPPSTGLFVGLNKGHIVTKKELPPRPSDRKGKTSKRVHFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNVLRKMRAGGAGDKKK 110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun4g01354 110 MobiDBLite consensus disorder prediction 1 37 - -
Viun4g01354 110 Gene3D 60S ribosomal protein L36 2 108 IPR038097 -
Viun4g01354 110 MobiDBLite consensus disorder prediction 79 110 - -
Viun4g01354 110 PANTHER 60S RIBOSOMAL PROTEIN L36 1 108 IPR000509 GO:0003735|GO:0005840|GO:0006412
Viun4g01354 110 FunFam 60S ribosomal protein L36 1 106 - -
Viun4g01354 110 ProSitePatterns Ribosomal protein L36e signature. 55 65 IPR000509 GO:0003735|GO:0005840|GO:0006412
Viun4g01354 110 MobiDBLite consensus disorder prediction 87 110 - -
Viun4g01354 110 Pfam Ribosomal protein L36e 8 101 IPR000509 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun4g01354 Viun-Chr4 21005634 21007492 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun4g01354 7 110 Cytoplasmic Ribosomal Protein Gene Family AT5G02450 83.654 1.20e-58 174
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun4g01354 K02920 - gmx:100785591 220.705