Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun4g01332 ATGCCACATTACACTGGAAAGACCATGGAAGAGATTGCAGCTGTCAAGATTCAAACTGCATTTCGTGGATATATGGCAAGAAGAGCATTGCGTGCCCTGAGAGGTTTGGTGAGGCTGAAAACCGTAGTGCAAGGGCAATCTGTTAAAAGACAAGCTTCTAGCACCCTACGAAGCATGCAAACTCTAGCAAGATTACAGTCTCAGATTCGTGAAAGGAGAATTAGAATGTCTGAAGAGAACCAAGCTCTTCAGCGCCAACTGCAGCAGAAACATGAAAAACAACTTGAGAAGCTGCGTGCTGCTCAGGTTGGAGAAGAATGGGATCACAGTTTGCAGTCAAAGGATCAAATTGAAGCCAAATTGTTGCACAAACAAGAAGCAGCTTTAAGAAGAGAGAGGGCTTTGGCCTATTCATTCTCACATCAGCAAACATGGAAGGGCAATTCAAAGTCATTAAATCCCACATTTATGGACCCAAACAATCCCCAATGGGGGTGGAGTTGGTTAGAGAGGTGGATGGCTACTCGGCCATGGGATGGCCACAGCACTGTGGATCACAATGATCATGCATCAGTGAAGAGTGCAGCAAGCAGGGCCATGACAGTAGGAGAAATTGGGAAAGGTTATTCTCTCCAAGATCATAACCATGACAAAAGAGCTTCCCCTTTTGGCCAGAAGGCAAGAAGACCATCCCCTCACATTTCACCTTCAAAGGCACCATCTGCTAGTGGCAAGGCAAGGCCATCAAGCTCAAAGGGTAGTGTGTTCTGGGGTGGAGATGAGGACTCAAGAAGCATGTTCAGCATTCAATCGGAGAGATATCGCCGACACAGCATTGCAGGATCCTCAGTGAGAGATGATGAGAGTCTTGCAAGCTACCCTGCCATTCCAAGTTACATGGCACCTACAAGCTCAGCCAAGGCCAGGTTCAAAATCCAAAGGCCTTCACCTGAAAAAGGAGGTGCTGCTGTAAGGAAACGTCTTTCTTTCTCTCCTTCAGCTGCTCCAAGAAGGCATTCTGATCCTCCTAAACCCTAA 1038 0.4692 MPHYTGKTMEEIAAVKIQTAFRGYMARRALRALRGLVRLKTVVQGQSVKRQASSTLRSMQTLARLQSQIRERRIRMSEENQALQRQLQQKHEKQLEKLRAAQVGEEWDHSLQSKDQIEAKLLHKQEAALRRERALAYSFSHQQTWKGNSKSLNPTFMDPNNPQWGWSWLERWMATRPWDGHSTVDHNDHASVKSAASRAMTVGEIGKGYSLQDHNHDKRASPFGQKARRPSPHISPSKAPSASGKARPSSSKGSVFWGGDEDSRSMFSIQSERYRRHSIAGSSVRDDESLASYPAIPSYMAPTSSAKARFKIQRPSPEKGGAAVRKRLSFSPSAAPRRHSDPPKP 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun4g01332 345 MobiDBLite consensus disorder prediction 207 262 - -
Viun4g01332 345 MobiDBLite consensus disorder prediction 302 345 - -
Viun4g01332 345 Pfam IQ calmodulin-binding motif 13 31 IPR000048 GO:0005515
Viun4g01332 345 PANTHER IQ-DOMAIN 5-RELATED 10 342 - -
Viun4g01332 345 MobiDBLite consensus disorder prediction 236 250 - -
Viun4g01332 345 Gene3D iswi atpase 7 59 - -
Viun4g01332 345 MobiDBLite consensus disorder prediction 210 224 - -
Viun4g01332 345 ProSiteProfiles IQ motif profile. 10 38 IPR000048 GO:0005515
Viun4g01332 345 SMART iq_5 9 31 IPR000048 GO:0005515
Viun4g01332 345 Coils Coil 62 93 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun4g01332 Viun-Chr4 20427104 20431186 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun4g01332 4 344 IQD Protein Family AT5G03040 52.941 4.26e-114 337
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun4g01332 - - gmx:100809448 527.324