Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun4g01330 ATGGGGAAAAAAGGAAGTTGGTTTTCAGCAGTGAAGAAAGTTTTCAGCCCAGATTCCAAAAAAGATAAGAAAAAACAGAAAAGTGACAAGTCAAGCAGTAACAAGGAGAGGGAAATTGCAGCAGATGTTAAATTAATTGATGCTGAGAAAGAACAAAGCAAGCATGCTGCTTCTTTGGCTTTTGCCACTGCTGTTGCAGCAGAGGCTGCTGTTGCTGCTGCTCATGCTGCTGCAGAGGTTGTTCGTCTCACAAGTATGCCACATTACACTGGAAAGACCATGGAAGAGATTGCAGCTGTCAAGATTCAAACTGCATTTCGTGGATATATGGCAAGAAGAGCATTGCGTGCCCTGAGAGGTTTGGTGAGGCTGAAAACCGTAGTGCAAGGGCAATCTGTTAAAAGACAAGCTTCTAGCACCCTACGAAGCATGCAAACTCTAGCAAGATTACAGTCTCAGATTCGTGAAAGGAGAATTAGAATGTCTGAAGAGAACCAAGCTCTTCAGCGCCAACTGCAGCAGAAACATGAAAAACAACTTGAGAAGCTGCGTGCTGCTCAGGTTGGAGAAGAATGGGATCACAGTTTGCAGTCAAAGGATCAAATTGAAGCCAAATTGTTGCACAAACAAGAAGCAGCTTTAAGAAGAGAGAGGGCTTTGGCCTATTCATTCTCACATCAGCAAACATGGAAGGGCAATTCAAAGTCATTAAATCCCACATTTATGGACCCAAACAATCCCCAATGGGGGTGGAGTTGGTTAGAGAGGTGGATGGCTACTCGGCCATGGGATGGCCACAGCACTGTGGATCACAATGATCATGCATCAGTGAAGAGTGCAGCAAGCAGGGCCATGACAGTAGGAGAAATTGGGAAAGGTTATTCTCTCCAAGATCATAACCATGACAAAAGAGCTTCCCCTTTTGGCCAGAAGGCAAGAAGACCATCCCCTCACATTTCACCTTCAAAGGCACCATCTGCTAGTGGCAAGGCAAGGCCATCAAGCTCAAAGGGTAGTGTGTTCTGGGGTGGAGATGAGGACTCAAGAAGCATGTTCAGCATTCAATCGGAGAGATATCGCCGACACAGCATTGCAGGATCCTCAGTGAGAGATGATGAGAGTCTTGCAAGCTACCCTGCCATTCCAAGTTACATGGCACCTACAAGCTCAGCCAAGGCCAGGTTCAAAATCCAAAGGCCTTCACCTGAAAAAGGAGGTGCTGCTGTAAGGAAACGTCTTTCTTTCTCTCCTTCAGCTGCTCCAAGAAGGCATTCTGATCCTCCTAAACCCTAA 1293 0.4609 MGKKGSWFSAVKKVFSPDSKKDKKKQKSDKSSSNKEREIAADVKLIDAEKEQSKHAASLAFATAVAAEAAVAAAHAAAEVVRLTSMPHYTGKTMEEIAAVKIQTAFRGYMARRALRALRGLVRLKTVVQGQSVKRQASSTLRSMQTLARLQSQIRERRIRMSEENQALQRQLQQKHEKQLEKLRAAQVGEEWDHSLQSKDQIEAKLLHKQEAALRRERALAYSFSHQQTWKGNSKSLNPTFMDPNNPQWGWSWLERWMATRPWDGHSTVDHNDHASVKSAASRAMTVGEIGKGYSLQDHNHDKRASPFGQKARRPSPHISPSKAPSASGKARPSSSKGSVFWGGDEDSRSMFSIQSERYRRHSIAGSSVRDDESLASYPAIPSYMAPTSSAKARFKIQRPSPEKGGAAVRKRLSFSPSAAPRRHSDPPKP 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun4g01330 430 ProSiteProfiles IQ motif profile. 95 123 IPR000048 GO:0005515
Viun4g01330 430 MobiDBLite consensus disorder prediction 17 37 - -
Viun4g01330 430 MobiDBLite consensus disorder prediction 321 335 - -
Viun4g01330 430 Coils Coil 147 178 - -
Viun4g01330 430 PANTHER IQ-DOMAIN 5-RELATED 1 427 - -
Viun4g01330 430 MobiDBLite consensus disorder prediction 387 430 - -
Viun4g01330 430 MobiDBLite consensus disorder prediction 292 347 - -
Viun4g01330 430 Pfam IQ calmodulin-binding motif 98 116 IPR000048 GO:0005515
Viun4g01330 430 Gene3D iswi atpase 92 134 - -
Viun4g01330 430 MobiDBLite consensus disorder prediction 295 309 - -
Viun4g01330 430 SMART iq_5 94 116 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun4g01330 Viun-Chr4 20427104 20432174 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun4g01330 1 429 IQD Protein Family AT5G03040 48.060 2.16e-127 374
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun4g01330 - - gmx:100809448 592.423