Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun4g01329 ATGGGGAAAAAAGGAAGTTGGTTTTCAGCAGTGAAGAAAGTTTTCAGCCCAGATTCCAAAAAAGATAAGAAAAGTGACAAGTCAAGCAGTAACAAGGAGAGGGAAATTGCAGCAGATGTTAAATTAATTGATGCTGAGAAAGAACAAAGCAAGCATGCTGCTTCTTTGGCTTTTGCCACTGCTGTTGCAGCAGAGGCTGCTGTTGCTGCTGCTCATGCTGCTGCAGAGGTTGTTCGTCTCACAAGTATGCCACATTACACTGGAAAGACCATGGAAGAGATTGCAGCTGTCAAGATTCAAACTGCATTTCGTGGATATATGGCAAGAAGAGCATTGCGTGCCCTGAGAGGTTTGGTGAGGCTGAAAACCGTAGTGCAAGGGCAATCTGTTAAAAGACAAGCTTCTAGCACCCTACGAAGCATGCAAACTCTAGCAAGATTACAGTCTCAGATTCGTGAAAGGAGAATTAGAATGTCTGAAGAGAACCAAGCTCTTCAGCGCCAACTGCAGCAGAAACATGAAAAACAACTTGAGAAGCTGCGTGCTGCTCAGGTTGGAGAAGAATGGGATCACAGTTTGCAGTCAAAGGATCAAATTGAAGCCAAATTGTTGCACAAACAAGAAGCAGCTTTAAGAAGAGAGAGGGCTTTGGCCTATTCATTCTCACATCAGCAAACATGGAAGGGCAATTCAAAGTCATTAAATCCCACATTTATGGACCCAAACAATCCCCAATGGGGGTGGAGTTGGTTAGAGAGGTGGATGGCTACTCGGCCATGGGATGGCCACAGCACTGTGGATCACAATGATCATGCATCAGTGAAGAGTGCAGCAAGCAGGGCCATGACAGTAGGAGAAATTGGGAAAGGTTATTCTCTCCAAGATCATAACCATGACAAAAGAGCTTCCCCTTTTGGCCAGAAGGCAAGAAGACCATCCCCTCACATTTCACCTTCAAAGGCACCATCTGCTAGTGGCAAGGCAAGGCCATCAAGCTCAAAGGGTAGTGTGTTCTGGGGTGGAGATGAGGACTCAAGAAGCATGTTCAGCATTCAATCGGAGAGATATCGCCGACACAGCATTGCAGGATCCTCAGTGAGAGATGATGAGAGTCTTGCAAGCTACCCTGCCATTCCAAGTTACATGGCACCTACAAGCTCAGCCAAGGCCAGGTTCAAAATCCAAAGGCCTTCACCTGAAAAAGGAGGTGCTGCTGTAAGGAAACGTCTTTCTTTCTCTCCTTCAGCTGCTCCAAGAAGGCATTCTGATCCTCCTAAACCCTAA 1284 0.4626 MGKKGSWFSAVKKVFSPDSKKDKKSDKSSSNKEREIAADVKLIDAEKEQSKHAASLAFATAVAAEAAVAAAHAAAEVVRLTSMPHYTGKTMEEIAAVKIQTAFRGYMARRALRALRGLVRLKTVVQGQSVKRQASSTLRSMQTLARLQSQIRERRIRMSEENQALQRQLQQKHEKQLEKLRAAQVGEEWDHSLQSKDQIEAKLLHKQEAALRRERALAYSFSHQQTWKGNSKSLNPTFMDPNNPQWGWSWLERWMATRPWDGHSTVDHNDHASVKSAASRAMTVGEIGKGYSLQDHNHDKRASPFGQKARRPSPHISPSKAPSASGKARPSSSKGSVFWGGDEDSRSMFSIQSERYRRHSIAGSSVRDDESLASYPAIPSYMAPTSSAKARFKIQRPSPEKGGAAVRKRLSFSPSAAPRRHSDPPKP 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun4g01329 427 MobiDBLite consensus disorder prediction 384 427 - -
Viun4g01329 427 MobiDBLite consensus disorder prediction 289 344 - -
Viun4g01329 427 Gene3D iswi atpase 89 131 - -
Viun4g01329 427 SMART iq_5 91 113 IPR000048 GO:0005515
Viun4g01329 427 PANTHER IQ-DOMAIN 5-RELATED 1 424 - -
Viun4g01329 427 MobiDBLite consensus disorder prediction 292 306 - -
Viun4g01329 427 Pfam IQ calmodulin-binding motif 95 113 IPR000048 GO:0005515
Viun4g01329 427 MobiDBLite consensus disorder prediction 318 332 - -
Viun4g01329 427 Coils Coil 144 175 - -
Viun4g01329 427 ProSiteProfiles IQ motif profile. 92 120 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun4g01329 Viun-Chr4 20427104 20432174 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun4g01329 1 426 IQD Protein Family AT5G03040 47.845 2.19e-126 372
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun4g01329 - - gmx:100809448 584.334