Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun4g01323 ATGGAAGGGTTTGAAGAAGGGTTTGTTGTGAAAGGAGGCATAAAATTGCCAATTGGGTTCAGATTTTGTCCCACAGATCAGGAGCTTCTCCTTCACTACCTCAAGAACAAGGCCTTTGCTCAACAATTACCTGCTTCAGTCATTCCAGAAACTGATATTTTTCAGACTCACCCATGCCTGCTTCCAGGTGATTTGAGGGAAAAAAGGTACTTTTTTAGCAATTGTGGAAAAGTGAACAAGAGAAGTGCCGGTTCCGGTTGTTGGAAATATGTTGGAAAAGAAAAAGAAATAAGGGTTTGTGAAAGCAATGAAGTAATTGGGATGAAGAAAACACTGATTTTCTGCAAAGGTTCCCATGAAACAAGAACTCGCTGGGTCATGCACGAATTGCGTCTTGTAACTTCGTACGCATATCAGATGGCGGTGGCAGATTTTGCTGTGTATGTGATATTTCAGAAAAGGAAGAAGACGCCAAAAGCATCTCAGCAGAGACCCTTTTGTAGCAGCAAACTTCAGAGAGTACATGATGTTAAACCTAGCATAATGGATTTTGATCACGATAATATACTGCTTCCGCCACCTTCTTCCCCATCTTTACTTCAGGACTGTGGTGAAACTTCTAAGAACTTAGACTAG 636 0.4135 MEGFEEGFVVKGGIKLPIGFRFCPTDQELLLHYLKNKAFAQQLPASVIPETDIFQTHPCLLPGDLREKRYFFSNCGKVNKRSAGSGCWKYVGKEKEIRVCESNEVIGMKKTLIFCKGSHETRTRWVMHELRLVTSYAYQMAVADFAVYVIFQKRKKTPKASQQRPFCSSKLQRVHDVKPSIMDFDHDNILLPPPSSPSLLQDCGETSKNLD 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun4g01323 211 Pfam No apical meristem (NAM) protein 17 132 IPR003441 GO:0003677|GO:0006355
Viun4g01323 211 ProSiteProfiles NAC domain profile. 16 153 IPR003441 GO:0003677|GO:0006355
Viun4g01323 211 Gene3D NAC domain 25 158 IPR036093 GO:0003677|GO:0006355
Viun4g01323 211 SUPERFAMILY NAC domain 10 153 IPR036093 GO:0003677|GO:0006355
Viun4g01323 211 PANTHER NAC TRANSCRIPTION FACTOR 56 16 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun4g01323 Viun-Chr4 20370129 20373167 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun4g01323 8 155 NAC Transcription Factor Family AT5G13180 42.675 2.32e-37 129
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Viun4g01323 NAM 9.2e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun4g01323 - - vun:114181461 430.254