Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun4g01290 ATGGCCACCCTCTCCAATCGCCGTCACACACTCCCGCAGGATGACATTGATGGCCGGGCGATAACTACAGACTCCATTTCCACCAACTACCGCACGATGCCCTACCTTGTCACCGAAAAAACTGTGCTCCAGCCTCACCTCGGTCGGCAAGAATCTTTCCGCCGAAACATTGGCCACGTTGCCGCAGAAACCTACTTGATTACTCGCCTCGCCATCACGCTTCTTCGGTACCTTGGGATTGGTTACCGTTGGATTACACAATTACTTGCTCTTGGATGTTATGCCATGCTACTTATGCCCGGTTTTTTACAAGTTGCATATTACTATTTCTTCTCACCCAAGGTACAGCGAAGCCTTGTTTATGGAGATCAGCCCAGAAACAGGTTCGATCTGTATCTACCAGCCGATATTGGTGAACCTAAGCCAGTTTTGATATTTGTAACCGGGGGAGCATGGATTATTGGAAATTTTCCTCAAGGGACTATCAGTGACATGGTAAATGACACTTCTCAGGGAATTTCCTTTATCATCAACAACATAGCTAATTATGGAGGTGACCCTAACAGAGTTTATCTAATGGGACAATCTGCCGGTGCTCATATTTCATCTTGCGCTTTACTGGAGCAAGCAGCCAGAGAAACAAATAAAGGAGAGAATGTTTCTTGGAGCATTTCCCAGATCAAAGCTTATTTTGGTTTATCTGGAGGATACAACTTATTGGATTTAGTGGATCATTTTGACAATCGTGGCTTGTACCGTCGGATCTTTTTAAGCATAATGGAAGGTGAAGAGTCTTTGAAGGTATATTCACCTGAAATTAAAATTCAAGATCCATGTCTCAAAAGTGCCATTCCTCACTTCCCATCAGTATATCTGGTCCATGGAACTGCAGATTATTCCATACCATCAGTAGCGAGTGAACGGTTTGCTGATGCTCTTAAGAAGGCAGGGGCAAGAGCTGAGTTGATTTTATGTGAGGGGAAGAGTCATACAGATTTGTTTCTACAAGATCCACTCCGAGGAGGTATTGATTACCTATTCGAGCATGCAGTTGCCGTTATACATTCCAATGATAGTGATGCTCTTACAAAGGACGCCTTTGCACCCCGAAGAAAACAGTTTGTTCCTGAGATTTTATTAAAGTTGGCCACCAAGATAAGTCCCTTCTAA 1170 0.4393 MATLSNRRHTLPQDDIDGRAITTDSISTNYRTMPYLVTEKTVLQPHLGRQESFRRNIGHVAAETYLITRLAITLLRYLGIGYRWITQLLALGCYAMLLMPGFLQVAYYYFFSPKVQRSLVYGDQPRNRFDLYLPADIGEPKPVLIFVTGGAWIIGNFPQGTISDMVNDTSQGISFIINNIANYGGDPNRVYLMGQSAGAHISSCALLEQAARETNKGENVSWSISQIKAYFGLSGGYNLLDLVDHFDNRGLYRRIFLSIMEGEESLKVYSPEIKIQDPCLKSAIPHFPSVYLVHGTADYSIPSVASERFADALKKAGARAELILCEGKSHTDLFLQDPLRGGIDYLFEHAVAVIHSNDSDALTKDAFAPRRKQFVPEILLKLATKISPF 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun4g01290 389 PANTHER AB HYDROLASE SUPERFAMILY PROTEIN C4A8.06C 157 338 - -
Viun4g01290 389 Pfam BD-FAE 162 313 - -
Viun4g01290 389 SUPERFAMILY alpha/beta-Hydrolases 107 339 IPR029058 -
Viun4g01290 389 Gene3D alpha/beta hydrolase 111 338 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun4g01290 Viun-Chr4 19595727 19617402 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun4g01290 49 389 Carbohydrate Esterase AT1G26120 60.383 8.76e-157 448
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun4g01290 K15889 - gmx:100788814 614.379