Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun4g01289 ATGGCCACCCTCTCCAATCGCCGTCACACACTCCCGCAGGATGACATTGATGGCCGGGCGATAACTACAGACTCCATTTCCACCAACTACCGCACGATGCCCTACCTTGTCACCGAAAAAACTGTGCTCCAGCCTCACCTCGGTCGGCAAGAATCTTTCCGCCGAAACATTGGCCACGTTGCCGCAGAAACCTACTTGATTACTCGCCTCGCCATCACGCTTCTTCGGTACCTTGGGATTGGTTACCGTTGGATTACACAATTACTTGCTCTTGGATGTTATGCCATGCTACTTATGCCCGGTTTTTTACAAGTTGCATATTACTATTTCTTCTCACCCAAGGTACAGCGAAGCCTTGTTTATGGAGATCAGCCCAGAAACAGGTTCGATCTGTATCTACCAGCCGATATTGGTGAACCTAAGCCAGTTTTGATATTTGTAACCGGGGGAGCATGGATTATTGGGTATAAAGCATGGGGTTCCCTTTTAGGACTACAGTTGGCAGAAAGAGGCATTATAGTGGCATGCTTAGATTACAGAAATTTTCCTCAAGGGACTATCAGTGACATGGTAAATGACACTTCTCAGGGAATTTCCTTTATCATCAACAACATAGCTAATTATGGAGGTGACCCTAACAGAGTTTATCTAATGGGACAATCTGCCGGTGCTCATATTTCATCTTGCGCTTTACTGGAGCAAGCAGCCAGAGAAACAAATAAAGGAGAGAATGTTTCTTGGAGCATTTCCCAGATCAAAGCTTATTTTGGTTTATCTGGAGGATACAACTTATTGGATTTAGTGGATCATTTTGACAATCGTGGCTTGTACCGTCGGATCTTTTTAAGCATAATGGAAGGTGAAGAGTCTTTGAAGGTATATTCACCTGAAATTAAAATTCAAGATCCATGTCTCAAAAGTGCCATTCCTCACTTCCCATCAGTATATCTGGTCCATGGAACTGCAGATTATTCCATACCATCAGTAGCGAGTGAACGGTTTGCTGATGCTCTTAAGAAGGCAGGGGCAAGAGCTGAGTTGATTTTATGTGAGGGGAAGAGTCATACAGATTTGTTTCTACAAGATCCACTCCGAGGAGGTATTGATTACCTATTCGAGCATGCAGTTGCCGTTATACATTCCAATGATAGTGATGCTCTTACAAAGGACGCCTTTGCACCCCGAAGAAAACAGTTTGTTCCTGAGATTTTATTAAAGTTGGCCACCAAGATAAGTCCCTTCTAA 1245 0.4386 MATLSNRRHTLPQDDIDGRAITTDSISTNYRTMPYLVTEKTVLQPHLGRQESFRRNIGHVAAETYLITRLAITLLRYLGIGYRWITQLLALGCYAMLLMPGFLQVAYYYFFSPKVQRSLVYGDQPRNRFDLYLPADIGEPKPVLIFVTGGAWIIGYKAWGSLLGLQLAERGIIVACLDYRNFPQGTISDMVNDTSQGISFIINNIANYGGDPNRVYLMGQSAGAHISSCALLEQAARETNKGENVSWSISQIKAYFGLSGGYNLLDLVDHFDNRGLYRRIFLSIMEGEESLKVYSPEIKIQDPCLKSAIPHFPSVYLVHGTADYSIPSVASERFADALKKAGARAELILCEGKSHTDLFLQDPLRGGIDYLFEHAVAVIHSNDSDALTKDAFAPRRKQFVPEILLKLATKISPF 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun4g01289 414 PANTHER AB HYDROLASE SUPERFAMILY PROTEIN C4A8.06C 104 363 - -
Viun4g01289 414 FunFam Isoprenylcysteine alpha-carbonyl methylesterase ICME 111 363 - -
Viun4g01289 414 Pfam BD-FAE 130 338 - -
Viun4g01289 414 Gene3D alpha/beta hydrolase 111 363 IPR029058 -
Viun4g01289 414 SUPERFAMILY alpha/beta-Hydrolases 107 364 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun4g01289 Viun-Chr4 19595727 19617570 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun4g01289 49 414 Carbohydrate Esterase AT1G26120 66.120 4.60e-179 506
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun4g01289 K15889 - gmx:100788814 676.781