Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun4g01288 ATGGCCACCCTCTCCAATCGCCGTCACACACTCCCGCAGGATGACATTGATGGCCGGGCGATAACTACAGACTCCATTTCCACCAACTACCGCACGATGCCCTACCTTGTCACCGAAAAAACTGTGCTCCAGCCTCACCTCGGTCGGCAAGAATCTTTCCGCCGAAACATTGGCCACGTTGCCGCAGAAACCTACTTGATTACTCGCCTCGCCATCACGCTTCTTCGGTACCTTGGGATTGGTTACCGTTGGATTACACAATTACTTGCTCTTGGATGTTATGCCATGCTACTTATGCCCGGTTTTTTACAAGTTGCATATTACTATTTCTTCTCACCCAAGGTACAGCGAAGCCTTGTTTATGGAGATCAGCCCAGAAACAGGTTCGATCTGTATCTACCAGCCGATATTGGTGAACCTAAGCCAGTTTTGATATTTGTAACCGGGGGAGCATGGATTATTGGGTATAAAGCATGGGGTTCCCTTTTAGGACTACAGTTGGCAGAAAGAGGCATTATAGTGGCATGCTTAGATTACAGAAATTTTCCTCAAGGGACTATCAGTGACATGGTAAATGACACTTCTCAGGGAATTTCCTTTATCATCAACAACATAGCTAATTATGGAGGTGACCCTAACAGAGTTTATCTAATGGGACAATCTGCCGGTGCTCATATTTCATCTTGCGCTTTACTGGAGCAAGCAGCCAGAGAAACAAATAAAGGAGAGAATGTTTCTTGGAGCATTTCCCAGATCAAAGCTTATTTTGGTTTATCTGGAGGATACAACTTATTGGATTTAGTGGATCATTTTGACAATCGTGGCTTGTACCGTCGGATCTTTTTAAGCATAATGGAAGGTGAAGAGTCTTTGAAGGTATATTCACCTGAAATTAAAATTCAAGATCCATGTCTCAAAAGTGCCATTCCTCACTTCCCATCAGTATATCTGGTCCATGGAACTGCAGATTATTCCATACCATCAGTAGCGAGGATCCACTCCGAGGAGGTATTGATTACCTATTCGAGCATGCAGTTGCCGTTATACATTCCAATGATAGTGATGCTCTTACAAAGGACGCCTTTGCACCCCGAAGAAAACAGTTTGTTCCTGAGATTTTATTAA 1125 0.4391 MATLSNRRHTLPQDDIDGRAITTDSISTNYRTMPYLVTEKTVLQPHLGRQESFRRNIGHVAAETYLITRLAITLLRYLGIGYRWITQLLALGCYAMLLMPGFLQVAYYYFFSPKVQRSLVYGDQPRNRFDLYLPADIGEPKPVLIFVTGGAWIIGYKAWGSLLGLQLAERGIIVACLDYRNFPQGTISDMVNDTSQGISFIINNIANYGGDPNRVYLMGQSAGAHISSCALLEQAARETNKGENVSWSISQIKAYFGLSGGYNLLDLVDHFDNRGLYRRIFLSIMEGEESLKVYSPEIKIQDPCLKSAIPHFPSVYLVHGTADYSIPSVARIHSEEVLITYSSMQLPLYIPMIVMLLQRTPLHPEENSLFLRFY 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun4g01288 374 SUPERFAMILY alpha/beta-Hydrolases 107 325 IPR029058 -
Viun4g01288 374 PANTHER AB HYDROLASE SUPERFAMILY PROTEIN C4A8.06C 104 327 - -
Viun4g01288 374 Pfam BD-FAE 130 327 - -
Viun4g01288 374 Gene3D alpha/beta hydrolase 111 336 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun4g01288 Viun-Chr4 19595668 19617402 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun4g01288 45 330 Carbohydrate Esterase AT3G02410 72.727 1.15e-156 444
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun4g01288 K15889 - gmx:100788814 549.28