Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun4g01286 ATGATAACGGCGGAAGAAAGTGGTTTCCCCAAGCGCTGCAACGTGAGAGAGCCTCCTCTGCTTCAATGCGCAGAGCTGGTGCTACCCTACCTTAACCCTTCAGAACTTGCTAACATCTCTCTCATATGCAAACCTCTTCTCAAACTCTCTCGCTCCATCACCTTCCGCCGCGCCTCCGACGCATCCAGAACCTTCGAGACCTTTCCGATTCCGTTCCTCAACACGGTCGATTCCCACCCATACGCGTACTTCCTGTATACGCGCTCCCTCGTCCTCTCCTCTCCACTCCCCCTCCTGCGCCAGCCCTGGGGCTCTTCGGCAGTTTCCCCCTTCGCGCAGTGTCGCCTTCTTCGTGCCGATTCAGTGGGCTTCGTCGATGGCACGGGCCGGGCCGTGTCGGGCTGCGATTGCGAGGCGTGTGATGGCGGTGAGTGTCCTTGTGCTGGCCTGGATGGGCTGGACGACGTTGGCAGAGAGTGCGGGCCCGGGTGCCGGTGTGGGCCTGAGTGCGGGAAGCGGTTGACACGGAATGGGGTTGCGGTGAGGGTGAAGATTGTGAGGCATAGGAGGAAAGGGTGGGGGTTGCATGCGGATCAGTTAATCGCGAAAGGCGAGTTTGTGTTTGAGTATGCAGGTGAACTCTTGACAACGAAGGAAGCCCAGAGGAGACATCAATACTACGATGAACTGGCTTCGCAGGGTCATTCCTCTTCAGCTCTTTTGGTTGTAAGGGAACATCTTCCTTCTGGAAAGGCATGTCTGAGATTAAATATCGATGCGACAAGATTAGGAAACATTGCACGATTTGTAAATCATTCATGTGATGCTGGTAACTTAAGCACAAAGCTAGTTAGAAGTTCAGGAGCTTTGTTCCCCCGTCTATGCTTCTTTGCTTCAAAAGATATCCTAGTAGATGACGAGCTTACTTTTAGCTATGGAGAAATCAGGAAAAGGTCAAAGGGGTTGCCATGCTTTTGCAATAGCCCTTCTTGCGTTGGAACACTGCCCTCTGAAGACACTTAA 1023 0.5318 MITAEESGFPKRCNVREPPLLQCAELVLPYLNPSELANISLICKPLLKLSRSITFRRASDASRTFETFPIPFLNTVDSHPYAYFLYTRSLVLSSPLPLLRQPWGSSAVSPFAQCRLLRADSVGFVDGTGRAVSGCDCEACDGGECPCAGLDGLDDVGRECGPGCRCGPECGKRLTRNGVAVRVKIVRHRRKGWGLHADQLIAKGEFVFEYAGELLTTKEAQRRHQYYDELASQGHSSSALLVVREHLPSGKACLRLNIDATRLGNIARFVNHSCDAGNLSTKLVRSSGALFPRLCFFASKDILVDDELTFSYGEIRKRSKGLPCFCNSPSCVGTLPSEDT 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun4g01286 340 ProSiteProfiles SET domain profile. 181 313 IPR001214 GO:0005515
Viun4g01286 340 SMART set_7 181 319 IPR001214 GO:0005515
Viun4g01286 340 ProSiteProfiles Post-SET domain profile. 320 336 IPR003616 -
Viun4g01286 340 SUPERFAMILY SET domain 68 333 IPR046341 -
Viun4g01286 340 Pfam SET domain 192 313 IPR001214 GO:0005515
Viun4g01286 340 Gene3D SET domain 46 322 IPR046341 -
Viun4g01286 340 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 59 329 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun4g01286 159 335 C2H2 Transcription Factor Family AT2G23740 33.696 8.63e-23 97.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Viun4g01286 SET 8.4e-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun4g01286 K11433 - gmx:100786871 524.628