Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun4g01285 ATGGGAAATAGGGTTCATCTTTCGGTGCTTCTGGTTTTGGTAACAGTTTTAGTTTCAATCTTTCACTCGGAGCAACTATCCTCTCACTCTCAGACCCTGCTAAGAATTCAACGGCTATTGAACTTTCCAGCTGTTTTAAGCAGCTGGAACAACAACACAGACTTTTGCAGCACAGATTCAACATCTTCTCTCACTGTTGTATGCTATGATGGTACCATAACCCAGCTGCACATTGTTGGTGAATCAAGAGCTCCACTTCTCGCTAAAAATTTCTCAATAAATTCCTTTTTCACAACACTGGTTAGGCTTCCCAATCTGAAAGTCCTCACTTTGGTTTCTCTTGGCATATGGGGTCCATTGCCTGGTAAGATTGCTCATTTGTCATCACTGGAAATTTTCAATGCTAGTTCAAATTTCCTATATGGTTCCATCCCTCCAGAGTTCTCATTACTGTCACATCTCCAAACACTCATTCTAGATCACAACATGTTTTCTGGCCATCTTCCTGAATGGTTTGATTCCTTTCCAGCTTTAACTGTGTTAAGTTTGAAACACAACTTGTTCAATGGTTCACTTCCGGATTCTCTGAGTAGCTTGGAGAATATGAGAATTCTTTCACTTTCTCATAACCACTTTTATGGACCAGTGCCTGATTTGCACCGTTTGACGAATCTCCAAGTGCTGGAATTGGATGATAATGGTTTTGGACCCCGGTTTCCCCAGCTTGGTGACAAACTTGTTACTCTAGTACTAAGAAACAACAAGTTCAGGTCTAGCATCCCTGATGAAATGAGCTCATGCTATCAACTTGAGAGACTTGACATTTCAGCAAACACATTTGTTGGACCATTCCAACTAGCACTAATGTCACTCCCTTCTATTACTTACCTCAACATTTCCGGGAACAAATTAACAGGAATGCTTTTGGAGAATCTGTCTTGCAATCCTGGACTTCAAGCAGTGGATTTGTCCTCAAATCTTTTGACTGGGATCTTACCAAAATGTTTAATCTCAAATGCCAATGATAGGACTGCCTTGTATGCCAGAAATTGTCTAGAGGAGACAAATCAAAATCAGCATGCACTACCCTTTTGCCACACTGAAGCCATAGCTGTGGGAGTAGTACCCGAGGGAAAGAAGCACAAACGAGTATCTAAGGCAGTTCTTTCCCTTGGGATAGTATGTGGAACTTTTGGAGGAGTAGCAATTATTGCACTGCTTTTTTTTATTATCAGAAGAGAAAATGTCAAAAGAAAAACCAAGAATCCTCCTCCAACAAAATTAATATCAGAGAATGCAGCTTCAGGATATACCTCTAAGTTACTCTCTGATGCAAGGTATATATCTCAAACAATGAAATTCGGAACAGTGGATCTGCCTCCTTATCGAGCTTTCTCACTTGATGAGATTGTAGCAGCTACAAACAACTTTGACTCGGCTTGTTTTATGGGTGAAGGTTCTCAGGGAAAGATGCACAGAGGTCAACTAAAGGATGGCTTACTTGTTGCCATTAGAAGTGTAAAAGTCACCAAAAGCTTCAGCACTCAAGATTTTGTGCATTACATAGAGCAGATATTCAAATACAGGCATCGTCATTTAGTCAGTGTTCTTGGACACTGCATTGAATGTTATTTGGATGATTCAAGTGTCAGTAGCATATTTATTGTGTTTGAGTATATTCCTAATGGCACACTCAAGAGCTGGATTTCAGATAGGCATTACAAAAAATCCCTGACGTGGACGCAACGCATAGAAGCTGCTATTGGAGTAGCAAAAGGCATCCAATATTTGCATACAGGAATTGTACCTAGTGTATACTCAAATAATCTCAAAATCTCAGATGTTTTACTTGACCAAAATTTTGTTGCAAAAATCAAAATTTATGACCCGCCTTTGTTATCTCTTATGAGGAAGGTTGGGCAAGGTAATCCTTCTAGAGAATTAAAAAGTCCTAGCACTAACAAAAATGTAAAACAGGTAGACGAGTCTGATGTATATGACTTTGGAGTAATCCTGCTGGAACTCATTCTAGGAAGGACAATAAAGTCAAGGAATGTGGACACTTTAAAGGATCTGTTGCAAGCAAGCATAACAGCTGATGGTGAAGCTAGGAGGAGCATTATAGATCCAGAAGTTCGCAAGGTGTGCTTAGATCAATCGTTGAAGACAGTGATGGAAATTTGTGTGAGGTGCCTAGTCAAAGAACCAGCAGAGAGACCCTCTATTGAGGATGTTTTGTGGAATCTGCAGTTTGCAACTCAAGTCCAAGATGCATGGGTAGGAGACTCGCAAAGTAGTAGTGATGGCTCACCCATCTCACCTCTAGCATCTATACGAATGACCTTCCATTAG 2352 0.4035 MGNRVHLSVLLVLVTVLVSIFHSEQLSSHSQTLLRIQRLLNFPAVLSSWNNNTDFCSTDSTSSLTVVCYDGTITQLHIVGESRAPLLAKNFSINSFFTTLVRLPNLKVLTLVSLGIWGPLPGKIAHLSSLEIFNASSNFLYGSIPPEFSLLSHLQTLILDHNMFSGHLPEWFDSFPALTVLSLKHNLFNGSLPDSLSSLENMRILSLSHNHFYGPVPDLHRLTNLQVLELDDNGFGPRFPQLGDKLVTLVLRNNKFRSSIPDEMSSCYQLERLDISANTFVGPFQLALMSLPSITYLNISGNKLTGMLLENLSCNPGLQAVDLSSNLLTGILPKCLISNANDRTALYARNCLEETNQNQHALPFCHTEAIAVGVVPEGKKHKRVSKAVLSLGIVCGTFGGVAIIALLFFIIRRENVKRKTKNPPPTKLISENAASGYTSKLLSDARYISQTMKFGTVDLPPYRAFSLDEIVAATNNFDSACFMGEGSQGKMHRGQLKDGLLVAIRSVKVTKSFSTQDFVHYIEQIFKYRHRHLVSVLGHCIECYLDDSSVSSIFIVFEYIPNGTLKSWISDRHYKKSLTWTQRIEAAIGVAKGIQYLHTGIVPSVYSNNLKISDVLLDQNFVAKIKIYDPPLLSLMRKVGQGNPSRELKSPSTNKNVKQVDESDVYDFGVILLELILGRTIKSRNVDTLKDLLQASITADGEARRSIIDPEVRKVCLDQSLKTVMEICVRCLVKEPAERPSIEDVLWNLQFATQVQDAWVGDSQSSSDGSPISPLASIRMTFH 783
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun4g01285 783 ProSiteProfiles Protein kinase domain profile. 477 760 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun4g01285 783 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 560 765 - -
Viun4g01285 783 Gene3D Ribonuclease Inhibitor 28 146 IPR032675 -
Viun4g01285 783 SUPERFAMILY Protein kinase-like (PK-like) 457 753 IPR011009 -
Viun4g01285 783 PANTHER UNNAMED PRODUCT 87 679 - -
Viun4g01285 783 Gene3D Ribonuclease Inhibitor 147 241 IPR032675 -
Viun4g01285 783 Gene3D Ribonuclease Inhibitor 242 355 IPR032675 -
Viun4g01285 783 Gene3D Transferase(Phosphotransferase) domain 1 560 766 - -
Viun4g01285 783 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 26 244 - -
Viun4g01285 783 Pfam Protein tyrosine and serine/threonine kinase 483 746 IPR001245 GO:0004672|GO:0006468
Viun4g01285 783 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 450 559 - -
Viun4g01285 783 Gene3D Phosphorylase Kinase; domain 1 440 559 - -
Viun4g01285 783 Pfam Leucine rich repeat 245 304 IPR001611 GO:0005515
Viun4g01285 783 Pfam Leucine rich repeat 152 212 IPR001611 GO:0005515
Viun4g01285 783 SUPERFAMILY L domain-like 31 350 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun4g01285 Viun-Chr4 19218307 19224994 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun4g01285 42 777 Miscellaneous Gene Families AT3G03770 60.916 0.0 859
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-1 Viun4g01285 PK_Tyr_Ser-Thr 9e-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun4g01285 - - gmx:100813207 1315.44