Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun4g01250 ATGGATCCCTCTCGCCGCGCCCCGCGCGCCGTGATCGACCCCGTCCCCAAGTTCCGCCAAGTCGGGTTCTTCGCCCCGCCCGAACGCTCCCAATCTGGTCCTCCAAACACGACCCACTCTTCGCCCCCAATCTCCAACTCCCTCTCGCCGGTCATGATCCCGCCGCCGCGCCACCTATCGGACAACCTTCTCCTCCACGCGCCCCCCGCCTCATCTCCCCTTCGCGCAGACTCCGGCAGCGGCGGAACCTCCTTCGACCACGCGGACTTGTTCACCGCGCCGCTGTCGCCCGTTCTGCCGTCGTCGTCGTACTCCAGCAGGATCGCCGGCGACTTCTACAAGGGAAACGGTGGGAAGCTCGCAGCGTCGTCTTTCCCCCGCGGAGGTTTCGACCTGACGGCAATGAAGGCGGCGGCGGCCGCGAGCGTCGTTGTGCCGGCAAGCGAGCTGACCACGGTTTCCGTGGTGAATGATTCGCTAGGGATTCCCGAAAAAGAAAAAGCAAGCCGAGGAGGAGGGTCAGCAGCGGAAGTGAAAGAGCAACCTGCTAGTTCAAAACAGAAACCAAAAACCTCAAAGGCTGAAAGACGGGCCCTTCAAGAAGCTCAAAGAGCCGCAAAGGCTGCAGCAAAAGCTGAAGGAAATAAAGCATCTGGAACTGCAGCCTCAGTAAATGCCAAACCAGCTAAAGCTGCAAAGCCTGCTCAGAAAATTGATAATGCAGCTGTTGCAGCATCTGAGAAGAAGGGAGGTGAGATTCCACCAGAAAAGGATAGAAAAAAAGATGCTCCTCAACCACGGATGCAGTATGATGACAAGAGTCGAGTGGAGAAAGCTAAACGTCGTGCAGTGGTAAAACAAACTGAAGCTAGGAACAGAGTTGAGTTGTTCAGGCATTTGCCGCAATATGAACATGGGAGTCAGCTTCCAGATCTCGAGGCAAGGTTTTTCCATCTTTCTCCAGTGCACCCAGCTGTTTATAAGGTGGGTTTGCAGTATCTAACTGGAGATATATCTGGTGCCAATGCTCGGTGTATTGCAATGCTTCAAGCATTTCAGGAGGCAATCAAAGACTACAAGGTTCCACACGAGAAGACTCTTGTGAGGGACTTAACAGCAAAAATTAGTAGTTATGTATCATTTCTTATTGAGTGTCGACCTCTGTCAATCAGCATGGGAAATGCTATTAGGTTTCTCAAAAGTCGGATAGCCAAGTTACCTTTGACCTTGTCTGAATCAGAAGCAAAAGCTTCTCTCCATTCAGATATTGAGCGTTTTATTAGTGAGAAGATTATACTAGCCAACAAAGTGATAGTGAAGCATGCTGTCACCAAAATAAGAGATGGTGATGTTCTTCTAACTTATGGGTCCTCGTCAGCTGTTGAAATGGTACTATTACATGCACATGAGTTAGGAAGACAGTTTCGCGTTGTGGTAGTTGACTCTTGTCCAAAGCTTAGAGGGCAACTTTTGCTGCGCAGGCTGGTGGAGAAAGGTCTTAGCTGTACATACACTCATATAAATGCCGTTTCCTATATAATGCATGAAGTTACTCGAGTATTTCTGGGTGCTTCATCAGTTTTATCTAATGGAACAGTATATTCAAGAGTAGGGACTGCATGTGTTGCAATGGTTGCTCATGCATTCCGTGTGCCTGTCATAGTATGTTGTGAGGCCTATAAATTTCATGAACGGGTACAGCTAGACTCAATATGCTCTAATGAACTTGGTGATCCAGATGCAATTTCAAATGTATTGGGTAGAGAGGATGTCAACCACTTGGATGGCTGGGCCAATATTGAAAATCTGCAACTCTTAAATCTGATTTATGATGCAACACCTTCAGATTATGTTTCAATGATTGTCACAGATTATGGCATGGTTCCCCCTACAAGTGTGCCTGTAATTGTAAGAGAATACGGGAGAGAACAGGTCTGGATATAA 1944 0.4866 MDPSRRAPRAVIDPVPKFRQVGFFAPPERSQSGPPNTTHSSPPISNSLSPVMIPPPRHLSDNLLLHAPPASSPLRADSGSGGTSFDHADLFTAPLSPVLPSSSYSSRIAGDFYKGNGGKLAASSFPRGGFDLTAMKAAAAASVVVPASELTTVSVVNDSLGIPEKEKASRGGGSAAEVKEQPASSKQKPKTSKAERRALQEAQRAAKAAAKAEGNKASGTAASVNAKPAKAAKPAQKIDNAAVAASEKKGGEIPPEKDRKKDAPQPRMQYDDKSRVEKAKRRAVVKQTEARNRVELFRHLPQYEHGSQLPDLEARFFHLSPVHPAVYKVGLQYLTGDISGANARCIAMLQAFQEAIKDYKVPHEKTLVRDLTAKISSYVSFLIECRPLSISMGNAIRFLKSRIAKLPLTLSESEAKASLHSDIERFISEKIILANKVIVKHAVTKIRDGDVLLTYGSSSAVEMVLLHAHELGRQFRVVVVDSCPKLRGQLLLRRLVEKGLSCTYTHINAVSYIMHEVTRVFLGASSVLSNGTVYSRVGTACVAMVAHAFRVPVIVCCEAYKFHERVQLDSICSNELGDPDAISNVLGREDVNHLDGWANIENLQLLNLIYDATPSDYVSMIVTDYGMVPPTSVPVIVREYGREQVWI 647
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun4g01250 647 Pfam Initiation factor 2 subunit family 338 630 IPR000649 GO:0044237
Viun4g01250 647 SUPERFAMILY NagB/RpiA/CoA transferase-like 321 640 IPR037171 -
Viun4g01250 647 Gene3D - 433 640 IPR042529 -
Viun4g01250 647 PANTHER TRANSLATION INITIATION FACTOR EIF-2B 39 644 - -
Viun4g01250 647 MobiDBLite consensus disorder prediction 155 285 - -
Viun4g01250 647 MobiDBLite consensus disorder prediction 250 285 - -
Viun4g01250 647 MobiDBLite consensus disorder prediction 30 47 - -
Viun4g01250 647 MobiDBLite consensus disorder prediction 1 82 - -
Viun4g01250 647 MobiDBLite consensus disorder prediction 183 202 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun4g01250 Viun-Chr4 17763732 17769283 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun4g01250 4 647 Eukaryotic Initiation Factors Gene Family AT5G38640 66.766 0.0 795
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun4g01250 K03680 - gmx:100775998 1081.24