Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun4g01175 ATGGTTGGACTAGAGTCACAGGTGCTACAAGTAAAGATGCTTTTAGATGTTGGATCTGATGATGTTGTCCACATGGTAGGATTCCATGGACTTGGTGGAGTAGGGAAAACGACACTTGTTGTTGCAGTTTATAATTCCATTGCTGACCATTTTGAAGCTTTATGTTTTCTTGAAAACGTGAGAGAAGCTTCAAGTAAACATGGGTTACTACATCTCCAAAGCACCCTTCTTTCTGAAACAGTTGGAGAGATTAAGTTAACAAGTGTTAAAAAAGGAATTTCTATAATACAGCACAGGCTGCAGCAAAAGAAGGTTCTTTTGATTCTAGATGATGTTGACAAAGAGGAACAACTACAGGCACTTGCTGGAAGACCTCATTGGTTTGGTCTAGGCAGTAGAGTCATTATTACAACTCGAGACAAACAATTGTTAAAATCTCATGGGGTTGAAAGAACATATGAGGTTAAAGAATTGAATGAAGAAAATGCTCTTGAATTACTTACTTGGAAAGCTTTCAAGTTTGAAAATTTTGATCCAAGTTACAAGGATGTTTTGAATCTAGCAGTGACTTATGCCTCAGGCCTTCCACTGGCTTTGGAAGTGATAGGTTCCAACTTATTTGGAAGAAACATAGAACAATGGAAAAGTGGTTTGGATCAGTACAAGAAAATTCCTAAAATGGATATCCAGGATACACTTAAAGTGAGTTATGATGCTTTGGAAGAAGATGAACAAAGTGTTTTTCTTGACATTGCTTGTTTCTTCAAAAACTATGACTTGGCAGAGGTTGAAGACATACTTCGTGCTCATCATGGTCATAACATTAAACATCATATTGATGTGTTGGTTGAAAAATCTCTCATAAAGATTAGTTTGGATGGTAAAGTGACACTACATGATTTGATAAAAGACATGGGTAGAGAAATTGTGCGTAGAGAATCACCCAAAGAGCCTGGGAAACGTAGCAGGTTATGGTTCCTTGAGGATATAGTTCAAGTTTTAGAAGACAATAAGGGAAGTGGTAAGATTGAAACCATATGCATGGATTTCCCTTCATTTGAAGAAGTGGAAATAGAATGGGATGGAGATGCCTTCAAGAAGATGAAAAATCTCAGAACACTTATTATCAGAAATGGTCATTTCTCCACAGGTCCAAAACATCTTCCTAATTCTTTGAGAGTGATGGAATGGTGGAGATATCCTTCACAGAATTTTCCACAGGATTTTCATCCAAAGAAACTTTCTATATTCAAGTTACCATACTGTGAGTTTACATCACTAGAGTTGAATGACTTAGTAAGACAGAAGTTTGTGAATATGACAAGTTTAAATTTTGACGAATGTCGATATTTAAAACAAATACCTGATGTATCATGTCTAACACATTTGGAAAACTTGTCATTTCGTTGGTGTCCAAAGTTATCTTCACTTCACTACTCAGTTGGGTTCTTGGAAAAACTTAAAATCTTAGATGCAGAAGGTTGCTCCAAGCTCAAGAGTTTTCCTCCAATCAAGTTAACCTCTCTTGAGCAACTCAAACTTCGGTATTGTCATAGTCTTGAAAACTTTCCAGAAGTATTAGGAAACATGGAAAATGTAAGAGAACTTGACTTGAAAGATACTCCTATAAAAAAATTCCCACTTTCATTTCAAAATCTTACTCGACTGCAAAAGTTACATTTGTGTCTGAGTTGTGGAGTGATGGAAAATGGTTGTGATGGGGTTCCCCTTTCAAGCATTTGTATGATGCCAGAACTGGTTGATATTGTAGCAAATGAATGGAAAGGTGAGCTTTTCTGTAAAGCCAATGAAGGTGTAGAAAAAGTGAGCTCAATCTTCTATACAAATGTTCAATATCTTCAACTCAGATGTTGCAACTTAACAGATGATTTTTTTCTGACACTTCTCCCATGGTTTGCCAATATGAAGAACTTAGACCTATCAGGGAATAATTTCATTATCATTCCAGAATGCATCAAAGAATTCCACTTTTTAACTAGGCTTAATTTGAACTTTTGTGAGCAACTTCAAGAAATCAAAGGCATTCCTCCAAACCTGAAATATTTCTCTGCAATAGATTGCATATCCTTGACTTCCTCATGTAGAAGCATGTTACTAAATCAGGAACTGCATGAGGCTGGAAGCACCTTCTTTTATTTGCCAGGAGCCAAGATTGTAGAGTGGTTTGAGTTCCAAACGTTGGAAGTGCCAATTTGTTTTTGGTTTCATGGCAAACTCCCAGCCATGGTTATTTGTCTTGCAATGGAACGAATGTGTGAGTATTCCTCGTCAAAAGGTTGTAAATACAGACCCTTGGTGATCCATAGCACATTTAGACTCATGTCACCCATTGTGATCATCAATGGCAACGAACATTTGTTACAAACTTGGGAGATGATGGATGATTGTACTTGTGTTTTTGACCTGAGGGAAACAAAACTGAAAAATGATTTTGATGAACAACTTTTGGAAAATGAATGGAACCATGCTGAGGTTACATGTCGATATGTCAGTTTAGGCCAAACCTTAATAAAACATGGAATCCATGTATTGAAACAGGATAGTAGCGTGGAGGAGATTCGATTCACTGATCCTTGCAAAAAAAGAAATCTTGATATAATGAGCTCAATAGCCCAAAATCACAGCAGCAACAATTGTTGA 2661 0.3679 MVGLESQVLQVKMLLDVGSDDVVHMVGFHGLGGVGKTTLVVAVYNSIADHFEALCFLENVREASSKHGLLHLQSTLLSETVGEIKLTSVKKGISIIQHRLQQKKVLLILDDVDKEEQLQALAGRPHWFGLGSRVIITTRDKQLLKSHGVERTYEVKELNEENALELLTWKAFKFENFDPSYKDVLNLAVTYASGLPLALEVIGSNLFGRNIEQWKSGLDQYKKIPKMDIQDTLKVSYDALEEDEQSVFLDIACFFKNYDLAEVEDILRAHHGHNIKHHIDVLVEKSLIKISLDGKVTLHDLIKDMGREIVRRESPKEPGKRSRLWFLEDIVQVLEDNKGSGKIETICMDFPSFEEVEIEWDGDAFKKMKNLRTLIIRNGHFSTGPKHLPNSLRVMEWWRYPSQNFPQDFHPKKLSIFKLPYCEFTSLELNDLVRQKFVNMTSLNFDECRYLKQIPDVSCLTHLENLSFRWCPKLSSLHYSVGFLEKLKILDAEGCSKLKSFPPIKLTSLEQLKLRYCHSLENFPEVLGNMENVRELDLKDTPIKKFPLSFQNLTRLQKLHLCLSCGVMENGCDGVPLSSICMMPELVDIVANEWKGELFCKANEGVEKVSSIFYTNVQYLQLRCCNLTDDFFLTLLPWFANMKNLDLSGNNFIIIPECIKEFHFLTRLNLNFCEQLQEIKGIPPNLKYFSAIDCISLTSSCRSMLLNQELHEAGSTFFYLPGAKIVEWFEFQTLEVPICFWFHGKLPAMVICLAMERMCEYSSSKGCKYRPLVIHSTFRLMSPIVIINGNEHLLQTWEMMDDCTCVFDLRETKLKNDFDEQLLENEWNHAEVTCRYVSLGQTLIKHGIHVLKQDSSVEEIRFTDPCKKRNLDIMSSIAQNHSSNNC 886
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun4g01175 886 Gene3D - 157 241 IPR042197 -
Viun4g01175 886 Pfam NB-ARC domain 8 225 IPR002182 GO:0043531
Viun4g01175 886 SUPERFAMILY L domain-like 359 703 - -
Viun4g01175 886 Gene3D Ribonuclease Inhibitor 333 595 IPR032675 -
Viun4g01175 886 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 2 691 IPR044974 GO:0006952
Viun4g01175 886 SUPERFAMILY "Winged helix" DNA-binding domain 228 335 IPR036390 -
Viun4g01175 886 Gene3D - 1 151 IPR027417 -
Viun4g01175 886 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 251 IPR027417 -
Viun4g01175 886 PRINTS Disease resistance protein signature 482 498 - -
Viun4g01175 886 PRINTS Disease resistance protein signature 192 206 - -
Viun4g01175 886 PRINTS Disease resistance protein signature 25 40 - -
Viun4g01175 886 PRINTS Disease resistance protein signature 99 113 - -
Viun4g01175 886 Gene3D Ribonuclease Inhibitor 600 713 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun4g01175 Viun-Chr4 14750182 14753863 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun4g01175 2 699 WRKY Transcription Factor Family AT5G45050 28.898 6.42e-68 244
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun4g01175 - - gmx:100784366 1291.17