Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun4g01054 ATGGAAGATAACCAGGGGCAAGAGGGGCAAGAGCAGCAGCAGCAGCAACAGCAACAACAGCAAAAGCAACCCTCCGAGAGAACCGAACCCGTGAGGTCAAGATGGACTCCCAAACCAGAACAAATCCTTATTCTCGAGTCCATCTTCAACAGTGGCATGGTTAACCCACCCAAAGACGAAACCGTCAGAATAAGGAAGCTGCTTGAGAAATTTGGCGCCGTTGGTGATGCCAACGTCTTCTACTGGTTCCAGAACCGCCGCTCTCGCTCCCGCCGCCGCCAGCGCCAGATTCAGGCCACCCTTAACAACGGTGGCGGTGCAAGTACCAACAATCCCTTTCAACACCACCATCAAAACAACCCTGCTCTTGTTGCGAACATGGGTTTTGCTAGTGCTACTTCCTCTTTCCTTAACCCCTCTTACATACCACCTGGTTCTTCTTCTTCCTCTTCTTCTCCTCCCTGTGGTGCTGAAGAAAGCTTCGATGATTTCTTCCCACCCTCTACTCAAATGGGTTTTCCTGGAATTGATCATCATGCTTCAGCTGCATCGTCTTCGTCAGTTTTGTACCCTCTTGAAGCTTCCAATTTGAACTATCACTCTGATATAGGATTTGGGGGAATTTCAGGAGTGATCACAGTGTTCATCAATGGGGTTCCAACAGAAGTTCCAAGGGGGCCAATGGACATGAAAACAGCTTTTGGTGAAGATGTAATGTTAGTTCATTCCTCTGGAATTTCGGTTCCCACCAATGAGTTTGGTTTCTTGATGCAGGGCTTGCAGCATGGTGAAAGCTACTTTGTGGTTTCAAAGCAAACACAAGTATGA 828 0.4819 MEDNQGQEGQEQQQQQQQQQQKQPSERTEPVRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLEKFGAVGDANVFYWFQNRRSRSRRRQRQIQATLNNGGGASTNNPFQHHHQNNPALVANMGFASATSSFLNPSYIPPGSSSSSSSPPCGAEESFDDFFPPSTQMGFPGIDHHASAASSSSVLYPLEASNLNYHSDIGFGGISGVITVFINGVPTEVPRGPMDMKTAFGEDVMLVHSSGISVPTNEFGFLMQGLQHGESYFVVSKQTQV 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun4g01054 275 MobiDBLite consensus disorder prediction 1 37 - -
Viun4g01054 275 Pfam Homeodomain 32 92 IPR001356 GO:0003677
Viun4g01054 275 SUPERFAMILY Homeodomain-like 26 100 IPR009057 -
Viun4g01054 275 MobiDBLite consensus disorder prediction 7 26 - -
Viun4g01054 275 ProSiteProfiles 'Homeobox' domain profile. 28 93 IPR001356 GO:0003677
Viun4g01054 275 Gene3D - 32 99 - -
Viun4g01054 275 PANTHER WUSCHEL-RELATED HOMEOBOX 11 11 272 IPR044558 GO:0003700|GO:0048830
Viun4g01054 275 FunFam WUSCHEL-related homeobox 11 32 99 - -
Viun4g01054 275 SMART HOX_1 30 97 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun4g01054 Viun-Chr4 11252741 11254954 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun4g01054 10 275 Wox Gene Family AT3G03660 49.645 9.87e-66 205
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Viun4g01054 Homeodomain 1.1e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun4g01054 - - aprc:113866574 342.043