Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun4g01053 ATGGAAGATAACCAGGGGCAAGAGGGGCAAGAGCAGCAGCAGCAGCAACAGCAACAACAGCAAAAGCAACCCTCCGAGAGAACCGAACCCGTGAGGTCAAGATGGACTCCCAAACCAGAACAAATCCTTATTCTCGAGTCCATCTTCAACAGTGGCATGGTTAACCCACCCAAAGACGAAACCGTCAGAATAAGGAAGCTGCTTGAGAAATTTGGCGCCGTTGGTGATGCCAACGTCTTCTACTGGTTCCAGAACCGCCGCTCTCGCTCCCGCCGCCGCCAGCGCCAGATTCAGGCCACCCTTAACAACGGTGGCGGTGCAAGTACCAACAATCCCTTTCAACACCACCATCAAAACAACCCTGCTCTTGTTGCGAACATGGGTTTTGCTAGTGCTACTTCCTCTTTCCTTAACCCCTCTTACATACCACCTGGTTCTTCTTCTTCCTCTTCTTCTCCTCCCTGTGGTGCTGAAGAAAGCTTCGATGATTTCTTCCCACCCTCTACTCAAATGGGTTTTCCTGGAATTGATCATCATGCTTCAGCTGCATCGTCTTCGTCAGTTTTGTACCCTCTTGAAGCTTCCAATTTGAACTATCACTCTGGATTTGGGGGAATTTCAGGAGTGATCACAGTGTTCATCAATGGGGTTCCAACAGAAGTTCCAAGGGGGCCAATGGACATGAAAACAGCTTTTGGTGAAGATGTAATGTTAGTTCATTCCTCTGGAATTTCGGTTCCCACCAATGAGTTTGGTTTCTTGATGCAGGGCTTGCAGCATGGTGAAAGCTACTTTGTGGTTTCAAAGCAAACACAAGTATGA 822 0.4842 MEDNQGQEGQEQQQQQQQQQQKQPSERTEPVRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLEKFGAVGDANVFYWFQNRRSRSRRRQRQIQATLNNGGGASTNNPFQHHHQNNPALVANMGFASATSSFLNPSYIPPGSSSSSSSPPCGAEESFDDFFPPSTQMGFPGIDHHASAASSSSVLYPLEASNLNYHSGFGGISGVITVFINGVPTEVPRGPMDMKTAFGEDVMLVHSSGISVPTNEFGFLMQGLQHGESYFVVSKQTQV 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun4g01053 273 Gene3D - 32 99 - -
Viun4g01053 273 MobiDBLite consensus disorder prediction 1 37 - -
Viun4g01053 273 SUPERFAMILY Homeodomain-like 26 100 IPR009057 -
Viun4g01053 273 MobiDBLite consensus disorder prediction 7 26 - -
Viun4g01053 273 ProSiteProfiles 'Homeobox' domain profile. 28 93 IPR001356 GO:0003677
Viun4g01053 273 PANTHER WUSCHEL-RELATED HOMEOBOX 11 11 270 IPR044558 GO:0003700|GO:0048830
Viun4g01053 273 FunFam WUSCHEL-related homeobox 11 32 99 - -
Viun4g01053 273 SMART HOX_1 30 97 IPR001356 GO:0003677
Viun4g01053 273 Pfam Homeodomain 32 92 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun4g01053 Viun-Chr4 11252741 11254954 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun4g01053 10 273 Wox Gene Family AT3G03660 50.357 6.87e-67 208
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Viun4g01053 Homeodomain 1.1e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun4g01053 - - aprc:113866574 347.051