Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun4g01024 ATGGCAAAGAAGCCGAAGCAGCGCCCTCCACCCGTGGAAAATCCTCCAACTGCTTCCTCCTCCGAATCCGAGGAAGATGATGACCGAAGGCATTCTTCTCAACCGCATGCAGCACCACCACCAACACCAGCACCAGCAGCACAGGTTTCTTCCTCTGAAGAGGAAGACGATTCTTCCGAAGAAGAAGACCAAGACGAGAAGCAACGTTCCACTCTCCCTGCTTCTGCAAACGCTCCCTCCATTCCTCACCCCAAATCCTCCTCTTCTGAATCCGAATCCGAATCCGACACTGACTCCCAACCTGCTCAGGTCAAACCCAAATCCAAGCCCAAGCCCGCGGACCAGCCCCAGCCCCAGCCCAAGGTCCAAGCCCAGCGTTCCTCCACGCCGGTGAAGCCGGGATCCAAGCGCCCCGCCGACGTAACAGAGCCGAAACGCGCGAAAAAGAAAGCAACCGAGGCTCCTTCTCCCTCCTTTGCTAACGAGGGGACGGAGGAGGACGGGAAGAAGGCCGGCGGGCAAGCGAAGGTGTTGTTCCAGAGGATCTGGAGCGAAGAAGACGAGCTCGGCATTCTTAAGGGCATACTTGAGTTCATCTCAAAGACTGGGCAAGAGCCTTACAGGTATGCCGACGCTTTCCACAACTTCATTAAGAAGTCACTCCACGTTGAGGTTTCCAGCCATCAGCTGAAGGAGAAGATTCGACGGATGAAGAAGAGGTTCCTCACTCATGCGGCCAGAGAGAAGAATGGGAAGGAGCCTCGGTTGTTCAAACCTCACCACAAGACCTTGTTTGAATTCTCCAAGAAGATTTGGGGTGAATGGCCCAACGGGCTGGTGGAAAAGTCCAAGCCTCTTGCCAAATACGTTACCAAGACTCCAAAGAAGGAATCTGCCACCACGGGTGTGGCAAAACCCAACGCCAAAGCGCCGTCACAGCCATCACCGTCGCTGCTGGCTTTGCCGGCGCCGGAAAATAGTGATAGTGGTGACGTGAGTTTGCTCTACAGCAATATTTCTTGTTTTAAAGAGCTGGATGAGGATGAGATGAAGAGAGGACTTACTTTGATTGGAGAATCCAAGAGGAAGGACTTGGAGAGAAGGTGGAAAGTGCTGCAATATTCTGAGATGGAACTTCTTGCGAATCGCTCTCTACTGATTGGGGAACAGATTAAGTTGGTATCTGAAGCCCTACAGTCATCCAACAATTAG 1212 0.5289 MAKKPKQRPPPVENPPTASSSESEEDDDRRHSSQPHAAPPPTPAPAAQVSSSEEEDDSSEEEDQDEKQRSTLPASANAPSIPHPKSSSSESESESDTDSQPAQVKPKSKPKPADQPQPQPKVQAQRSSTPVKPGSKRPADVTEPKRAKKKATEAPSPSFANEGTEEDGKKAGGQAKVLFQRIWSEEDELGILKGILEFISKTGQEPYRYADAFHNFIKKSLHVEVSSHQLKEKIRRMKKRFLTHAAREKNGKEPRLFKPHHKTLFEFSKKIWGEWPNGLVEKSKPLAKYVTKTPKKESATTGVAKPNAKAPSQPSPSLLALPAPENSDSGDVSLLYSNISCFKELDEDEMKRGLTLIGESKRKDLERRWKVLQYSEMELLANRSLLIGEQIKLVSEALQSSNN 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun4g01024 403 MobiDBLite consensus disorder prediction 138 152 - -
Viun4g01024 403 MobiDBLite consensus disorder prediction 118 132 - -
Viun4g01024 403 MobiDBLite consensus disorder prediction 291 325 - -
Viun4g01024 403 MobiDBLite consensus disorder prediction 70 104 - -
Viun4g01024 403 MobiDBLite consensus disorder prediction 1 171 - -
Viun4g01024 403 Pfam Protein of unknown function, DUF573 179 273 IPR007592 GO:0006355
Viun4g01024 403 PANTHER BNAANNG10740D PROTEIN-RELATED 39 396 IPR007592 GO:0006355
Viun4g01024 403 MobiDBLite consensus disorder prediction 294 322 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun4g01024 Viun-Chr4 10747780 10750293 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun4g01024 11 397 GeBP Transcription Factor Family AT1G61730 28.502 6.21e-32 122
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Viun4g01024 DUF573 5e-30 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun4g01024 - - vun:114182157 685.641