Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun4g00981 ATGGCACGTTCCATCTATAACACAAAACCCCTACACAGAAAACTACTACTCCTCAATATATCCTTCGTTTTCCTCGTCTGTCTCTTCCTCAATGCCTACCTCCATCCTTCTAGTTCCAATGTCGATGCCTCCACAAATGTGTTCAACCATGCTAGAATGCTCAGTGGCATCAGTGTTGATGGTTGCACTGATCTTCACAAGTACTTGGATAATGATTCTAAGTGCTTATATGTCAAATCCCATGCTCAGTGCAGGTCAAAAGGTTATATAAATTATCTGCAGATTTTTTACTGCAGCTTTGGGCATTCCCCAATTTTGGGTCATGCCCTGCTAATGCTGTGGCTTGTGATTTTGTTTTATCTTTTGGGAGATACAGCTTCAAATTACTTTTGTAGTAACCTGGAAGGTCTCTCAGACATCTTGAGACTATCCCCCACCATAGCTGGTGTAACCTTGCTTTCTCTGGGAAATGGTGCTCCTGATTTTTTTGCCAGTGTTGTTTCTTTCACAAGATCGAATGACGGTGCAGTTGGCCTGAACAGTATTCTGGGAGGAGCGTTTTTTGTGTCCAGTGCTGTTCTTGGGATCATAAGTTTTCTTGTCGGTGCAAATGAAACTGCAATTGACAAGGCTAGTTTCATTAGAGATGTCATTTTCTTCCTTTTCTCACTTTTCATTCTCCTTGTCATCATTTCTATCGGTAAAATCAGTTTGCTTGGTTCAATTTTTTATGTTTCCATTTACTTCCTCTATGTCTGTGCTGTGTCTGCAACACATTTCATCTATGGAGGGGACAGGACAGAAGGGGAACTTGCCTCATCTTGTGATGACTTGACTGAGTCAGGAGTACCCTTGCTAGGGTGTGTTGATGATGAGAAACCAAACAAAGAGGTAATGGAAGATGAAGGGCAGAAGAAACATGAGGGTTTTGGTAATAGTAATTCTTTTGACTTTACTTACTTGAGCAAGTTTTTACATGTACTAGAGCTACCTCTTTGCTTACCAAGAAGGCTTACTATACCAGTAGTGAGTGAAGAAGGTTGGTCAAAGCCATATGCTGTTATATCTGTGACATTGGCACCAGTGTTGTTTTCAGCTCTTTGTAACACCCAAAGGGAAAATGAGAGTTCAAGGAGTAGTCTTGTTTCATATTTAACAGCTGCATTAATTGGCATTGTTTTGGGGAACATGGCATGTGTGACAACCAAGAGCACAAGTCCACCCAGAAAGTGCTTGTTTCCTTGGCTAGCTGGGGGCTTTTCCATGAGTGTAACATGGACTTACATAATTGCTGAGGAACTTGTTTCCCTCTTAGTTGCTTTTGGGAATGTGATAGGGGTTAGTCCTTCAATCCTTGGACTAACTGTCCTGGCTTGGGGTAATTCTCTGGGAGATTTGATAGCCAATGGTGCAATGGCCAAGAATGGTGGAGCTGATGGGGCCCAAATAGCTGTCTCTGCTTGTTATGCAGGCCCTATGTTTAACATTTTGATGGGCTTGGGCTTACCTCTTGTACTCTCAGCATGGTCTGAATACCCAGAGTCTTATGTGATTCCCAAGGACCCTTCTCTTTATGCAACTCTTTTGTTCTTGATGGGAGGTGTGCTTTGGGCCCTTGTGATATTCACAAAGAAGAATATGAAGCTTGATAAGTCATTGGGAATCGGACTCTTGACCATTTACCTCTGCTTTTTGTTTATAAGGATGGTCATTGCAATTGGTGTTATTAAATTCTAG 1737 0.4191 MARSIYNTKPLHRKLLLLNISFVFLVCLFLNAYLHPSSSNVDASTNVFNHARMLSGISVDGCTDLHKYLDNDSKCLYVKSHAQCRSKGYINYLQIFYCSFGHSPILGHALLMLWLVILFYLLGDTASNYFCSNLEGLSDILRLSPTIAGVTLLSLGNGAPDFFASVVSFTRSNDGAVGLNSILGGAFFVSSAVLGIISFLVGANETAIDKASFIRDVIFFLFSLFILLVIISIGKISLLGSIFYVSIYFLYVCAVSATHFIYGGDRTEGELASSCDDLTESGVPLLGCVDDEKPNKEVMEDEGQKKHEGFGNSNSFDFTYLSKFLHVLELPLCLPRRLTIPVVSEEGWSKPYAVISVTLAPVLFSALCNTQRENESSRSSLVSYLTAALIGIVLGNMACVTTKSTSPPRKCLFPWLAGGFSMSVTWTYIIAEELVSLLVAFGNVIGVSPSILGLTVLAWGNSLGDLIANGAMAKNGGADGAQIAVSACYAGPMFNILMGLGLPLVLSAWSEYPESYVIPKDPSLYATLLFLMGGVLWALVIFTKKNMKLDKSLGIGLLTIYLCFLFIRMVIAIGVIKF 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun4g00981 578 Gene3D - 143 268 IPR044880 -
Viun4g00981 578 Gene3D - 353 571 IPR044880 -
Viun4g00981 578 Coils Coil 577 578 - -
Viun4g00981 578 PANTHER NA+/CA2+ K+ INDEPENDENT EXCHANGER 18 577 - -
Viun4g00981 578 Pfam Sodium/calcium exchanger protein 113 254 IPR004837 GO:0016020|GO:0055085
Viun4g00981 578 Pfam Sodium/calcium exchanger protein 416 569 IPR004837 GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun4g00981 Viun-Chr4 9263062 9264955 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun4g00981 55 576 Antiporters AT5G17860 51.977 4.62e-177 509
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun4g00981 K13754 - gmx:100818583 964.526