Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun4g00966 ATGTGTTTTGATAGCTTAGATGATGTAAAACAATTTTATAAAAATTACGGTATTAGAAGCGGCTTTGGTATTCGCACCAGGACTTCAGCAAGGGGCGAAGACAATGAAATCAACTACATCAAGTTGGTGTGTTCACGAGAGGGAAATTATGTGTCCGCTATTCCCCCGGAATTGAAGACCGTCCCAACTAAAGCAAAACAGTGTAAAGCTTCAATCACTGCAGCAAAGAAAGACGGACAATGGTTCATTAGGAGCGTTGTAACTGATCACAGTCATGACATTAGTCCGAAGAAGTCAAGGCTAATACGGGGCAACCGTAAAGTTGACATGCATTCAAGGCAAACTGTTGAGACTAACGATGACGCTGGTGTCCGAATTAACAAAAGTTTCCGCTCTCTTGTCTCTGAAGCAGGTGGATATGAAAACGTTAACTTCATTGAACGTGATGTTCGCAACTACATTGGTCAACAAAGGCGATCATTGTGTAAGGATGGGGATGGGCAGGCCCTTTTACGACATTTTTCAAAAATGCGGGAATTAAACAACGACTTCTTCTTTGAAATTGACATGGACGAAGACAACCGTATATGTAATGTTTTTTGGGCCGATGCGCGCAGTAGAGCGGCATCTGAGGATTTTGGTGATGTTGTGTCTTTTGACACCACATATCTGACCAACAAATATGACATGCCTTTCGCTCCTTTTGTAGGTGTTAATCACCATGGACACTCCATTTTATTAGGTTGTGGTCTAGTATCAGCTGAAGACACAAGGTCGTTCGTGTGGATTTTTGAATGCTGGCTTCGGTGCATGTATAACAAACCACCGAAGGAATTGTTACCGACCAATGTAAGGCAATGCTTAATGCAATTGGAGAAGTTTTCCCTACTACCAAACATCGATGGTGTCTATGGCACATAA 921 0.4224 MCFDSLDDVKQFYKNYGIRSGFGIRTRTSARGEDNEINYIKLVCSREGNYVSAIPPELKTVPTKAKQCKASITAAKKDGQWFIRSVVTDHSHDISPKKSRLIRGNRKVDMHSRQTVETNDDAGVRINKSFRSLVSEAGGYENVNFIERDVRNYIGQQRRSLCKDGDGQALLRHFSKMRELNNDFFFEIDMDEDNRICNVFWADARSRAASEDFGDVVSFDTTYLTNKYDMPFAPFVGVNHHGHSILLGCGLVSAEDTRSFVWIFECWLRCMYNKPPKELLPTNVRQCLMQLEKFSLLPNIDGVYGT 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun4g00966 306 Pfam MULE transposase domain 216 277 IPR018289 -
Viun4g00966 306 PANTHER OS01G0519700 PROTEIN 1 280 - -
Viun4g00966 306 Pfam FAR1 DNA-binding domain 11 95 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun4g00966 Viun-Chr4 9100852 9101772 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Viun4g00966 FAR1 3e-12 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun4g00966 - - vun:114180824 577.4