Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Viun4g00894 | ATGGGAAAGGCAAGAGGAGGAGAAGAAGCTGCTCTTTGTTTTCTGGTTTTCTTCTGGTTTTGGAGCTCTTCCAATGCTCTGCTTTCTCCAAAGGGAGTAAACTTTGAAGTTCAAGCTTTAATGGGGATAAAAGCTTTTCTTGTGGATCCACATGGTATTCTAGATAATTGGGATGGGGATGCAGTTGATCCATGCAGCTGGAATATGGTCACGTGTTCCCCTGAGAATCTTGTTGTTAGCCTGGGCATTCCCAGTCAAAATTTATCTGGTATTCTATCTCCAAGCATAGGAAACCTGACATATCTTCAGACTGTGGTGCTGCAAAATAACAACATAACTGGTTCAATCCCTTCAGAGATAGGAAAACTTTCCAAGCTTCAAACTCTTGATCTCTCTGACAACTTCTTCAATGGAGAGATTCCTCCCTCTCTGGGTCACCTCAGAAGCCTCCAGTACTTGAGGCTTAATAATAACAGTTTTGATGGAGAATGCCCAGTCTCACTAGCTAACATGGCGCAGCTTGCTTTTCTTGACTTGTCCTACAATAATCTGAGTGGCCCTATACCTAGAATTTTGGCCAAATCCTTCAGTGTTGTAGGAAACCCCTTAGTCTGCACCACAGAAAAAGAAAAAAATTGCCATGGGATGACACTTATGCCCATGTCAATGAACTTGAACAGTTCTGAGAATGCTTTACCATCTGGTAGAACAAAGGCTCACAAAATGGTCATTGCCTTTGGTCTGAGTCTTGGATTTCTCTGCATGATAGTTTTTGGACTTGGACTTATTCTATGGAGGAGGCACAAGCATAAACAAAAGTCATTCTTTGATGTTAAAGACCAGCATCATGAAGAAGTCTACCTTGGAAACTTGAAGAGGTTCCAACTAAGAGAACTCCAGATTGCTACTAACAACTTCAGCAACAAAAACATCCTCGGCAAGGGTGGTTTTGGACATGTCTACAAGGGAATTCTCCCAGATGGCACTCTTGTGGCAGTGAAGAGGCTTAAAGATGGCAGTGCAACTGGAGGAGATATACAATTTCAGACTGAAGTTGAAATGATAAGCTTGGCGGTGCACCGAAACCTCCTCAAACTCTATGGATTTTGCATGACACCAACAGAAAGGCTTTTGGTTTATCCTTACATGTCCAATGGCAGTGTTGCTTCTAGGCTCAAGGGTAAGCCAGTGTTGGATTGGGGCACAAGGAAACAAATTGCTATAGGAGCAGCAAGGGGACTGCTATACCTTCATGAGCAGTGTGATCCAAAGATAATCCACAGAGATGTGAAGGCTGCAAATATATTGCTTGATGACTATTGTGAGGCAGTGGTAGGTGACTTTGGGTTGGCTAAGCTTTTAGATCATCAAGATTCACATGTCACAACTGCAGTGAGAGGCACAGTGGGGCATATAGCACCAGAGTATCTTTCCACAGGGCAATCTTCTGAGAAGACTGATGTATTTGGATTTGGCATTCTGCTTCTTGAATTGATCACAGGCCAGAGGGCACTAGAATTTGGAAAAGCAGCCAACCAAAAAGGAGCCATGCTTGATTGGGTAAGGAAAATCCATCAAGAGAAGAAGCTTGAGTTGCTTGTGGACAAGGATCTGATGAACAACTATGACAGGATTGAGCTTGAGGAAATTGTTCAAGTGGCACTCTTGTGCACACAATATCTTCCTGGGCACAGGCCTCGAATGTCTGAAGTTGTACGCATGCTTGAAGGTGATGGTCTTGCAGAGAAATGGGAAGCTTCTCAAAGTGCTGACAACACCAAATGCAACAAACCACATGAACTCTCTTCATCAGATAGGTATTCTGACCTCACTGATGACTCTTCTTTGTTGGTTCAAGCAATGGAACTCTCAGGGCCCAGATGA | 1884 | 0.4342 | MGKARGGEEAALCFLVFFWFWSSSNALLSPKGVNFEVQALMGIKAFLVDPHGILDNWDGDAVDPCSWNMVTCSPENLVVSLGIPSQNLSGILSPSIGNLTYLQTVVLQNNNITGSIPSEIGKLSKLQTLDLSDNFFNGEIPPSLGHLRSLQYLRLNNNSFDGECPVSLANMAQLAFLDLSYNNLSGPIPRILAKSFSVVGNPLVCTTEKEKNCHGMTLMPMSMNLNSSENALPSGRTKAHKMVIAFGLSLGFLCMIVFGLGLILWRRHKHKQKSFFDVKDQHHEEVYLGNLKRFQLRELQIATNNFSNKNILGKGGFGHVYKGILPDGTLVAVKRLKDGSATGGDIQFQTEVEMISLAVHRNLLKLYGFCMTPTERLLVYPYMSNGSVASRLKGKPVLDWGTRKQIAIGAARGLLYLHEQCDPKIIHRDVKAANILLDDYCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALEFGKAANQKGAMLDWVRKIHQEKKLELLVDKDLMNNYDRIELEEIVQVALLCTQYLPGHRPRMSEVVRMLEGDGLAEKWEASQSADNTKCNKPHELSSSDRYSDLTDDSSLLVQAMELSGPR | 627 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Viun4g00894 | 627 | Gene3D | Ribonuclease Inhibitor | 33 | 215 | IPR032675 | - | |
Viun4g00894 | 627 | ProSiteProfiles | Protein kinase domain profile. | 306 | 561 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Viun4g00894 | 627 | Pfam | Leucine rich repeat N-terminal domain | 36 | 73 | IPR013210 | - | |
Viun4g00894 | 627 | SUPERFAMILY | Protein kinase-like (PK-like) | 283 | 576 | IPR011009 | - | |
Viun4g00894 | 627 | SMART | serkin_6 | 306 | 561 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Viun4g00894 | 627 | FunFam | Putative LRR receptor-like serine/threonine-protein kinase | 33 | 215 | - | - | |
Viun4g00894 | 627 | Gene3D | Phosphorylase Kinase; domain 1 | 275 | 382 | - | - | |
Viun4g00894 | 627 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 425 | 437 | IPR008271 | GO:0004672|GO:0006468 | |
Viun4g00894 | 627 | Pfam | Protein kinase domain | 307 | 572 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Viun4g00894 | 627 | Gene3D | Transferase(Phosphotransferase) domain 1 | 383 | 595 | - | - | |
Viun4g00894 | 627 | ProSitePatterns | Protein kinases ATP-binding region signature. | 312 | 334 | IPR017441 | GO:0005524 | |
Viun4g00894 | 627 | PANTHER | SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 | 15 | 586 | - | - | |
Viun4g00894 | 627 | SUPERFAMILY | L domain-like | 36 | 307 | - | - | |
Viun4g00894 | 627 | FunFam | Somatic embryogenesis receptor kinase 1 | 275 | 382 | - | - | |
Viun4g00894 | 627 | FunFam | Somatic embryogenesis receptor-like kinase 1 | 383 | 595 | - | - | |
Viun4g00894 | 627 | Pfam | Leucine Rich repeats (2 copies) | 102 | 141 | IPR025875 | - | |
Viun4g00894 | 627 | MobiDBLite | consensus disorder prediction | 586 | 610 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Viun4g00894 | Viun-Chr4 | 7831466 | 7835414 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Viun4g00894 | 12 | 627 | Receptor kinase-like Gene Family | AT5G16000 | 77.368 | 0.0 | 981 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-II | Viun4g00894 | Pkinase | 2.7e-43 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Viun4g00894 | - | - | gmx:100806650 | 1147.88 |