Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun4g00882 ATGCAAACCAGGGAAGTCTCAGCCCTCAATTATTTACTCCCTTCAAACCCTTCTCCCTACCCTCCCAACAACAACTTCACAACCCTCCAAAACAACATTCCCACATTTCAGTTCCAAAGATTCTCCACCCAATTATATGGCCACAACCACAACACCACCCCCTATGATTTCAGCCCTCAATCATCATGCATCAGCAGCAACTCCACCTCTGATGAGGCTGATGAACACCAACTCACTCTCATCAACGAGAGGAAGCACAGGAGAATGATATCAAACCGAGAATCCGCACGTAGGTCTCGGATGAGGAAGCAGAAACACCTTGATGAGCTTTGGTCTCAGGTCATGTGGCTCAGGAATGAGAACCACCAACTCATAGACAAACTCAACCATGTCTCAGAAAACCATGACCAAGTTCTCCAAGAAAATGCTCAGCTCAAAGAACAAGCCTCAGAACTTCGCCAAATGATCAGGGACATGCAGATACACAGTCCTTCCCCTTCCTTCACCCCTTTTCAAGATCATGATGTTCCTTGCAGCACCTCACCGTTTCTCAGATCAGATTCTTCAAACCAATCCAACTCATGTAACAACAACATGGATCTCCTCGGATGA 612 0.4641 MQTREVSALNYLLPSNPSPYPPNNNFTTLQNNIPTFQFQRFSTQLYGHNHNTTPYDFSPQSSCISSNSTSDEADEHQLTLINERKHRRMISNRESARRSRMRKQKHLDELWSQVMWLRNENHQLIDKLNHVSENHDQVLQENAQLKEQASELRQMIRDMQIHSPSPSFTPFQDHDVPCSTSPFLRSDSSNQSNSCNNNMDLLG 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun4g00882 203 Coils Coil 128 162 - -
Viun4g00882 203 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 87 102 IPR004827 GO:0003700|GO:0006355
Viun4g00882 203 MobiDBLite consensus disorder prediction 179 203 - -
Viun4g00882 203 FunFam BZIP transcription factor 82 133 - -
Viun4g00882 203 CDD bZIP_plant_GBF1 85 136 IPR045314 GO:0003700|GO:0006355
Viun4g00882 203 PANTHER BASIC LEUCINE ZIPPER 43-RELATED 9 166 IPR044521 -
Viun4g00882 203 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 82 145 IPR004827 GO:0003700|GO:0006355
Viun4g00882 203 SUPERFAMILY Leucine zipper domain 84 134 IPR046347 GO:0003700|GO:0006355
Viun4g00882 203 Gene3D - 82 137 - -
Viun4g00882 203 SMART brlzneu 80 144 IPR004827 GO:0003700|GO:0006355
Viun4g00882 203 Pfam bZIP transcription factor 84 142 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun4g00882 Viun-Chr4 7633605 7634479 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun4g00882 45 178 bZIP Transcription Factor Family AT3G30530 66.423 5.08e-53 166
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Viun4g00882 bZIP_1 2.5e-14 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun4g00882 - - aprc:113867865 286.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun4g00882 4 7633605 7634479 Viun5g00346 5 2069821 2070696 PCT