Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun4g00877 ATGACTATTGTGAACCTAGAACCCAGGGTAAAGAAGACAAAATCAAGGAAGAACAAAGCAGTGGTTGATGAGAAGTCACCTTTGATACCTAAAACTCTTGAGGCTGGTTCTTCAGGGTTTGATGATTTCAACGGTGCTTCATTTTCTGGGGCAGTTTTCAACTTGTCCACCACAATTATTGGTGCTGGGATCATGGGGTTGCCCGCATGTGTTAAAAAATTGGGGATGATACCTGGTCTTCTTTCTATCATCTTGATTGCTTTTTTGACAGAGAAGTCAATTGGGTTCATGATGAGGATTTCCCGGGCAGGGAATCTTTCTTCTTATGCCACTCTAGTTGGGGATACCTTTGGCAAATTTGGAAAAGCCCTGGTGCAGATATGTGTCATAGTCAACAACATTGGAATGCTGATCATTTACATGATTATTATCGGTGATGTGATTTCTGGAACATCTTCTGGTGGAATTCATCATTCTGGTTTACTTGAAGGATGGTTTGGAGTTCACTGGTGGACAGGACGTACATTTGTTCTTCTTGTTATAACACTTGCTGTGTTTTCACCTTTGTCCTGCTTCAAGCGCATTGATTCATTGAGATACACTTCTGCATTATCATTTGGTTTAGCAGTTGTCTTTCTCGTCATTGCTGTGGGAATTTCAATTTTCAAGATTGCAATTGGAGGCATCGGGATGCCTAGATTATTCCCTATCATTACTGATGTATCCTCAGTTTTTGAACTGTTCACAGTAACTCCTGTGGTTGTCACAGCCTATCTATGCCACTTCAATGTACACCCCATAGACAATGAACTCGAAGACTCATCACAGATTCGTGGGGTGGTGCGTGCTTCCCTTGCTCTATGTGCTTCAGTGTACTTATTGACAAGTTTCTTTGGGTTCCTCCTATTTGGTGAAGCAACTCTTGATGATGTGCTTGCAAATTTTGACACTGATCTTGGGATTCCTTTTGGTGCTGTGCTCAATGATGCTGTTCGTGCAACCTATGCTGCACATCTTGTGCTTGTATTTCCAGTTGTCTTCTATGCAGTGCGGATCAACCTTGATGGTCTCCTATTTCCATCATCTAGGCCTTTGGTTCTAGATAACGTCAGATTTGCAATAATTACTGTGGCACTTGTAGCTTTTTCCTTTTGGGGAGCGAATTTCATACCCAGCATTTGGGATATTTTCCAGTTCACTGGAGCAACGGCTGCAGCATGTTTAGCATTCATATTTCCAGCTTCTATCGTCCTTAAGGATCGGTACAACATTGCCACTAGAAGGGACAAGATTCTATCTGTCCTTATGATAGTGCTTGCAGTCTTTGCAAATGTTGTGGCTATATACAGTGATGCACTTGCCTTGATCCAGACTAGTCTTAGCTCAATGGGAGTGATATCATGA 1404 0.4202 MTIVNLEPRVKKTKSRKNKAVVDEKSPLIPKTLEAGSSGFDDFNGASFSGAVFNLSTTIIGAGIMGLPACVKKLGMIPGLLSIILIAFLTEKSIGFMMRISRAGNLSSYATLVGDTFGKFGKALVQICVIVNNIGMLIIYMIIIGDVISGTSSGGIHHSGLLEGWFGVHWWTGRTFVLLVITLAVFSPLSCFKRIDSLRYTSALSFGLAVVFLVIAVGISIFKIAIGGIGMPRLFPIITDVSSVFELFTVTPVVVTAYLCHFNVHPIDNELEDSSQIRGVVRASLALCASVYLLTSFFGFLLFGEATLDDVLANFDTDLGIPFGAVLNDAVRATYAAHLVLVFPVVFYAVRINLDGLLFPSSRPLVLDNVRFAIITVALVAFSFWGANFIPSIWDIFQFTGATAAACLAFIFPASIVLKDRYNIATRRDKILSVLMIVLAVFANVVAIYSDALALIQTSLSSMGVIS 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun4g00877 467 PANTHER AMINO ACID TRANSPORTER 44 445 - -
Viun4g00877 467 Pfam Transmembrane amino acid transporter protein 46 449 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun4g00877 Viun-Chr4 7454489 7458069 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun4g00877 21 457 Amino Acid or Auxin Permease AAAP Family AT5G38820 63.326 0.0 579
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun4g00877 K14207 - gmx:100785277 750.355
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun4g00877 4 7454489 7458069 Viun5g00349 5 2097865 2101983 PCT