Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun4g00875 ATGAGGAATGCAAGTGCTGCACCTGAGGCAGTGGAGAAAAAACCAAGAAGGAACAAGAGAGTTGTTGATGAGAATGTTCCTTTGTTGCCAAAGGTTCAGGCGAGTGATGATGATGATGATGATGATGCTTCAGGGTTTGAAGAGTTCAATGGAGCTTCATTTTGTGGGGCAGTTTTCAACTTGTCAACCACAATCATTGGTGCTGGAATCATGGGGTTACCAGCATGTGTGAAAAAGTTGGGGATGGTGCCTGGGCTTCTTGCTATAATCTTAACAGGTTTCTTGACAGAGAAGTCAATTGAGTTCATGATTAGGATTTCTAGGGTTGGGAATGTTTCCTCTTATGGGAGTCTCATGAGGGATGCTTTTGGAAAATCTGGAAAAGCTTTGGTGGAGATATGTGTTATAGTCAACAGCATTGGTGTGTTGATTATTTACATGATTATACTTGGGGATGTGATTTCTGGAACATCTTCTGGTGGAACTCACCATTCTGGTTTGCTTGAAGGCTGGTTTGGAGTTCAGTGGTGGACTGGAAGAACTTTTGTTGTTTCTTTTACAACAGTTGCTGTGTTTGCACCTTTGGTCAGTTTCAAGAGAATTGATTCATTGAAATTCACATCTGCATTATCAGTTGGGCTAGCAGTAGTTTTTCTGGTGATTGCTGTTGGAATGAGTGTGTTGAAGATCATAACCGGAGGCATTGGAATGCCCAGACTCTTCCCAATCATTACTGATATGACATCAATTTGGGAACTGTTCACTGTAGTTCCTGTGCTTGTCACTGCTTATATCTGCCACCCTAACGTACACCCTATAGCAAATGAGCTGGAGGACTCCTCTCAGATGAATGGCGTTGTACGTGCGTCACTTGCTCTGAGTGCTTCAGTGTACTTGCTCACAAGCTTCTTTGGGTTCCTCCTATTTGGCGAAGCAACACTTGATGATGTGCTTGCAAATTTTGACACTAATCTTGGAATTCCTTTGGGTTCTGTTCTAAATGATGTAGTTCGTTCCAGCTATGCAGCACATCTTGTGCTTGTATTTCCAGTTGTTTTCTATGGATTGCGTGTCAACCTAGATTCTCTCTTATTTCCATCATCTAGGCCTTTGACTCAACATAAACTCAGATTTGCATCAATTACTGTTACACTTGTTGCTGTTATCTTCCTCGGAGCAAATTTCATACCCAGCATTTGGGATATTTTTCAGTTCACTGGAGCAACAGCTGCTGTTTGTATAGCATTCATATTTCCAGCTTCCATCATTCTGAGGGATCGACACAACGTAGCAACCAAAAGGGACAAGATTCTATCTGTCTTTATGATATTTTTGGCTGTCTTGTCGAATGCTGTGGCTTTATACAGTGATACTTATGCCTTGATCAAGAAGAACAAAACTTATACATGA 1410 0.4149 MRNASAAPEAVEKKPRRNKRVVDENVPLLPKVQASDDDDDDDASGFEEFNGASFCGAVFNLSTTIIGAGIMGLPACVKKLGMVPGLLAIILTGFLTEKSIEFMIRISRVGNVSSYGSLMRDAFGKSGKALVEICVIVNSIGVLIIYMIILGDVISGTSSGGTHHSGLLEGWFGVQWWTGRTFVVSFTTVAVFAPLVSFKRIDSLKFTSALSVGLAVVFLVIAVGMSVLKIITGGIGMPRLFPIITDMTSIWELFTVVPVLVTAYICHPNVHPIANELEDSSQMNGVVRASLALSASVYLLTSFFGFLLFGEATLDDVLANFDTNLGIPLGSVLNDVVRSSYAAHLVLVFPVVFYGLRVNLDSLLFPSSRPLTQHKLRFASITVTLVAVIFLGANFIPSIWDIFQFTGATAAVCIAFIFPASIILRDRHNVATKRDKILSVFMIFLAVLSNAVALYSDTYALIKKNKTYT 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun4g00875 469 MobiDBLite consensus disorder prediction 1 42 - -
Viun4g00875 469 MobiDBLite consensus disorder prediction 7 24 - -
Viun4g00875 469 Pfam Transmembrane amino acid transporter protein 52 455 IPR013057 -
Viun4g00875 469 PANTHER AMINO ACID TRANSPORTER 44 449 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun4g00875 Viun-Chr4 7438114 7445801 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun4g00875 11 465 Amino Acid or Auxin Permease AAAP Family AT5G38820 62.144 0.0 590
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun4g00875 K14207 - gmx:100791286 726.857