Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun4g00835 ATGGCCTCTTCCGATATTAATTGGGACAGGCTAGATAAAACGAAGTTCTACGTCGTGGGAGCAGGACTCTTTACAGGTGTTACAGTAGCACTCTACCCGGTTTCTGTTGTGAAAACTAGGCTGCAGGTTGCTTCAAAGGATACTCTGGAGAGAAGTGCATTATCTGTTGTGAAAGGATTACTTAAAACGGATGGCATCCGTGGTTTGTATAAAGGGTTTTTTACAGTTATGACTGGTACAATTCCTACCAGAGTCATATTTCTTACTGCCTTGGAGACCACAAAGGTGGCTTCCCTCAGGATGCTGGAGCCATTTAGACTATCTGATACCACCCAGGCTGCCATATCAAATGGAGTAGCAGGCATGACATCATCACTTTTGGCACAAGCTATGTTTGTTCCAATTGATGTGGTTAGCCAAAAGTTGATGGTGCAAGGATACTCAGGCCATACACAATATACGGGGGGTTTAGATGTTGCTCGTAAGGTGTTAAGGTCTGATGGCATTAGGGGATTATATAAAGGATTTGGTCTATCTGTTATGACTTATGTACCATCTAGTGCTGTATGGTGGGCAAGTTATGGCTCAAGTAAACATTACTTATGGAGAATCTTGGGGGATAACTCCGGTGAGGAAGGCACTCCTAGTCTACCAAAGATTATATTAGTTCAGGCTACTGGAGGGATCATTGCTGGTGCTACTGCATCCTGTATTACAACCCCGTTGGATACAATCAAGACACGGTTACAGAAGTTCTCATTCTTAGAAAAGATGGCAAAGCAAAGGGGAAGATTGGAACATCATTTTATGATCATTGTATAA 822 0.427 MASSDINWDRLDKTKFYVVGAGLFTGVTVALYPVSVVKTRLQVASKDTLERSALSVVKGLLKTDGIRGLYKGFFTVMTGTIPTRVIFLTALETTKVASLRMLEPFRLSDTTQAAISNGVAGMTSSLLAQAMFVPIDVVSQKLMVQGYSGHTQYTGGLDVARKVLRSDGIRGLYKGFGLSVMTYVPSSAVWWASYGSSKHYLWRILGDNSGEEGTPSLPKIILVQATGGIIAGATASCITTPLDTIKTRLQKFSFLEKMAKQRGRLEHHFMIIV 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun4g00835 273 ProSiteProfiles Solute carrier (Solcar) repeat profile. 112 200 IPR018108 -
Viun4g00835 273 ProSiteProfiles Solute carrier (Solcar) repeat profile. 219 273 IPR018108 -
Viun4g00835 273 Pfam Mitochondrial carrier protein 115 202 IPR018108 -
Viun4g00835 273 Pfam Mitochondrial carrier protein 224 251 IPR018108 -
Viun4g00835 273 Pfam Mitochondrial carrier protein 21 96 IPR018108 -
Viun4g00835 273 PRINTS Mitochondrial carrier protein signature 173 191 IPR002067 GO:0055085
Viun4g00835 273 PRINTS Mitochondrial carrier protein signature 29 43 IPR002067 GO:0055085
Viun4g00835 273 PRINTS Mitochondrial carrier protein signature 228 250 IPR002067 GO:0055085
Viun4g00835 273 ProSiteProfiles Solute carrier (Solcar) repeat profile. 13 97 IPR018108 -
Viun4g00835 273 Gene3D Mitochondrial carrier domain 16 266 IPR023395 -
Viun4g00835 273 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 3 252 - -
Viun4g00835 273 SUPERFAMILY Mitochondrial carrier 9 258 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun4g00835 Viun-Chr4 6731562 6736669 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun4g00835 6 261 Chloroplast and Mitochondria Gene Families AT5G15640 69.231 3.53e-126 360
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun4g00835 K15121 - gmx:100819519 425.246