Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun4g00834 ATGACTGGTACAATTCCTACCAGAGTCATATTTCTTACTGCCTTGGAGACCACAAAGGTGGCTTCCCTCAGGATGCTGGAGCCATTTAGACTATCTGATACCACCCAGGCTGCCATATCAAATGGAGTAGCAGGCATGACATCATCACTTTTGGCACAAGCTATGTTTGTTCCAATTGATGTGGTTAGCCAAAAGTTGATGGTGCAAGGATACTCAGGCCATACACAATATACGGGGGGTTTAGATGTTGCTCGTAAGGTGTTAAGGTCTGATGGCATTAGGGGATTATATAAAGGATTTGGTCTATCTGTTATGACTTATGTACCATCTAGTGCTGTATGGTGGGCAAGTTATGGCTCAAGTAAACATTACTTATGGAGAATCTTGGGGGATAACTCCGGTGAGGAAGGCACTCCTAGTCTACCAAAGATTATATTAGTTCAGGCTACTGGAGGGATCATTGCTGGTGCTACTGCATCCTGTATTACAACCCCGTTGGATACAATCAAGACACGGTTACAGGTGACTGGACTTGAAAAGAAAATCTCTGTAAAACAAGTTGTTAAAGATTTGATTCTTGAAGATGGTTGGAAAGGTTTATATAGAGGATTAGGTCCAAGGTTTTTCAGCATGTCAGCGTGGGGCACTTCAATGATTGTGGCTTATGAATATCTGAAGCGCGTGTGTGCAAAGGATGAAGATGTGTAA 708 0.4266 MTGTIPTRVIFLTALETTKVASLRMLEPFRLSDTTQAAISNGVAGMTSSLLAQAMFVPIDVVSQKLMVQGYSGHTQYTGGLDVARKVLRSDGIRGLYKGFGLSVMTYVPSSAVWWASYGSSKHYLWRILGDNSGEEGTPSLPKIILVQATGGIIAGATASCITTPLDTIKTRLQVTGLEKKISVKQVVKDLILEDGWKGLYRGLGPRFFSMSAWGTSMIVAYEYLKRVCAKDEDV 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun4g00834 235 ProSiteProfiles Solute carrier (Solcar) repeat profile. 36 124 IPR018108 -
Viun4g00834 235 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 1 233 - -
Viun4g00834 235 ProSiteProfiles Solute carrier (Solcar) repeat profile. 143 228 IPR018108 -
Viun4g00834 235 Pfam Mitochondrial carrier protein 39 126 IPR018108 -
Viun4g00834 235 Pfam Mitochondrial carrier protein 148 232 IPR018108 -
Viun4g00834 235 Gene3D Mitochondrial carrier domain 1 234 IPR023395 -
Viun4g00834 235 SUPERFAMILY Mitochondrial carrier 2 225 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun4g00834 Viun-Chr4 6729974 6736656 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun4g00834 1 233 Chloroplast and Mitochondria Gene Families AT5G15640 69.492 1.03e-119 342
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun4g00834 K15121 - gmx:100819519 402.134
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun4g00834 4 6729974 6736656 Viun5g00425 5 2428931 2434287 PCT