Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun4g00823 ATGAGATTGTCTAGTTTAACTTTTCATGCAAATTTGGATTATGTTAAAGCTACAACTGATATGATAAGTCATTTGTATCTCATTAATTTGATTTGGTGGTATTGTAAACAAAACGAGATGATAGTGGTCTACGATTTCATGGGTCGTGGCACCCTAAGCGATCATCTCTACAACACGGATAATCCCCCTCTCTCGTGGAAGCAGCGCTTGCAGATATGCATCGGCGCAGCGCGTGGGCTGCACTATCTCCACACAGGCGGGAAGCACACGATCATCCACCGCAATGTCAAAACGACGAACATCTTGTTAGATGATAAGTGGGTGGCGAAGGTTTCAGACTTTGGTCTTTCAAGAATTGGGCCTACAGACACAGACAAGTCCCACGTGAGTACCCATGTGAAGGGAAGCTTTGGCTACATAGATCCCGAGTATTACAAACGATTTCGCTTAACGGAAAAGTCTGATGTTTACTCGTTCGGGGTTGTGCTCTTTGAGATACTGTGTGGTCGTCCAGCTTTGATTCACAGTGCGGAGACGCAGCAGGTGTCGCTTTCTAATTGGGTGAAACATTGTGATCGAAATGGGACCATAGCAGAGATTGTAGAGCCCGCGTTGAAGAAGAAGATTGCACCAGAGTGCCTGAAGAAGTTTTGTGAGATTGGGATGAGTTGCTTATTGGAAGATGGAACGCAGCGGCCGTGCATGAAGGATGTGGTTGCAATGCTGGAGTTTACGCTCCGGCTACAAGAAAGTGCAGAGCAAACGGCAATTGAAAAAGGAGAGGAAATTAGTGAGGATAGCTTTTCTACTACTAACTTGAATGTGACTACTACGACCAATTCCACCAGTGAAGGCAATGGCTACAGTAATAATACGGTGTTGTCTTGGACCCCTTTCTTGGAGATTATGGATGGATCCACAGCCGCGCTGACCCAATCCATTAAACGCAGACCTCTCACAGGGATAATAAAAAACAAAAGATGGTGGGATTACGTACTAAGGTTAGACTTCGCCATTATGAAAGAAAATCAATTATACAAAGTTTTGTATATTTATACAAATATTTAA 1068 0.4382 MRLSSLTFHANLDYVKATTDMISHLYLINLIWWYCKQNEMIVVYDFMGRGTLSDHLYNTDNPPLSWKQRLQICIGAARGLHYLHTGGKHTIIHRNVKTTNILLDDKWVAKVSDFGLSRIGPTDTDKSHVSTHVKGSFGYIDPEYYKRFRLTEKSDVYSFGVVLFEILCGRPALIHSAETQQVSLSNWVKHCDRNGTIAEIVEPALKKKIAPECLKKFCEIGMSCLLEDGTQRPCMKDVVAMLEFTLRLQESAEQTAIEKGEEISEDSFSTTNLNVTTTTNSTSEGNGYSNNTVLSWTPFLEIMDGSTAALTQSIKRRPLTGIIKNKRWWDYVLRLDFAIMKENQLYKVLYIYTNI 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun4g00823 355 ProSiteProfiles Protein kinase domain profile. 1 245 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun4g00823 355 SUPERFAMILY Protein kinase-like (PK-like) 21 245 IPR011009 -
Viun4g00823 355 FunFam Receptor-like protein kinase FERONIA 47 264 - -
Viun4g00823 355 Gene3D Transferase(Phosphotransferase) domain 1 47 270 - -
Viun4g00823 355 PANTHER OS07G0166700 PROTEIN 21 249 IPR045272 GO:0004714|GO:0006468
Viun4g00823 355 Pfam Protein tyrosine and serine/threonine kinase 20 242 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun4g00823 Viun-Chr4 6608125 6612610 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun4g00823 22 256 Receptor kinase-like Gene Family AT3G51550 64.831 7.99e-105 326
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Viun4g00823 PK_Tyr_Ser-Thr 7.2e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun4g00823 - - vun:114180430 706.442