Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun4g00821 ATGAGGTTCAAAGCAGTCATCTTCTTCCTTCTCCACTTATTCTCACACCTCCAAGCGTACACCCCAGTGGACAATTTCACCATCAGTTGCGGTTCCTCCGGAACATCCTACGATGGCCAAAGGACATGGACCGGGGACACAGGTTCAGTGCTCTTAACAAACGAAGACGCCACCGTTTCAGCCAAAGCCACAACAACGCAATCTCCTTCGACCAACCAGGTCCCCTACGCCACAGCTCGCCTTTCTCATTCCCAATTCAGTTACTCATTCTCTTTCTCCACCGGAGGCCCAAAATTCCTTCGCCTCTTCTTCTTCCCCGCTTCTTACCCTTCCTTTCCACGCACTCACGCATCCTTCTCTGTTCACTCAAACCAATTCATCCTCCTCCAAGATTTCAACGCCTCTCTCAACGCCGACGCTGAGAACAAGGAAGTCATCTTCAAAGAATACATAGTCTTCGTGGAGGAGGGTCAGAGTCTTATCCTCATCTTCACTCCCTCGCAGTCAAACTCCTACGCTTTCATCAACGGAATCGAGGTACTCTCCATGCCAAACAATTTATATTACACCTCAGCAAATGACACGGGCTTCACCAACGTGGGAAATACCACGCCCTACGTCCTTGCAACCGGCTTTGCTATGCAGACCGAGTACAGAATCGAAGTGGGAGGACAAGAAATATCACCACAAAACGACACCGGTTTGTTCAGAAAATGGGCCGGTGACGACGAAACTTATTTCGTTAAACAAAATCCTGGTCTATCAGCAGTGGCGGATACTAAGATGAACATAACAGTGAGTCCTGACTACGTGGCACCGGAGGCACTGTACAGAACATCGCGTAGCATGGGCACAAACGCCACTCTGAACCAAATCAGCAACCTCACATGGGAGTTTCCCGTTGATTCTGGCTTCACTTACCTCCTCAGACTCCACTTCTGCGAGTTTGAGCCCGATATTAAGGAGGTGGGTGACAGGGTCTTCTTCATTTACATAGCAAGCCAGTTAGCGGAGAGACGCGCAGATGTTATGATGTGGAGCGAGAAACGGAAAGGTTTCGGTGTGTATAAAGACTACGCCGTTTTCATTTCCAAGAATGATTATCAGAAAAAGGTTAATCTCTCCCTCCAAATGCATCCTTACGGTGATGAGACGAAATACAGCTCCGCCTTTTTGAACGGTCTCGAGATTTTTAAAATCAGCGACCCTAGGTCTAACAACCTCGCCGGACCTAACCCGATTGAGACTCCACAGGAAAAGGGAAATAGAAGAAACAGAGGGCGGATAATTGGTATCACGGCGGGGACAGTATCCGGTGTCGTTTTCATATCGCTTGTCGTTTCCTTTGTCCTCTTGTCGACCAATTTTAAGTGGAGTGCACTGTTGTTCCCAATGACCAAGTCAACCAAATACCACAATTTTTCTCTGCCATCTGATCAATGCCGTCGGTTTTCCTTCGTCGAGATCAAAGCCGCCACCAAAAACTTCGACAACGCCTTCATCGTCGGCGACGGAGGATTTGGACACGTGTACAAGGGCTACATCGACGACAACTCAGTCCCCGTGGCTATCAAGCGCCTTAGACAGGGTTCCCAGCAGGGGGCTAGCGAGTTCGTGAACGAGATCCAGATGCTCTCGCAGCTCCGACACCGCCATCTCGTCTCTCTCATCGGATACTGCTGCGACAACAAAGAGATGATCCTCGTTTACGAGTTCATGGGACGTGGAAACCTCCGCGAACATCTCTACGGCACAGATAATCCCTGTCTGTCGTGGAAGCAGCGCTTGAAGATTTGCATTGGCGCCGCGCGCGGGCTAAGCTATCTTCACAGTGGCGCCAAGCACATGATTATCCACCGTGACGTGAAAACAACGAACATCTTGTTGGATGAGAAGTGGGTGGCGAAGGTTTCAGATTTTGGGCTATCCAAAATGGGGCCGAATGAAATGTCGAAGGCCCACGTGAGCACCGCCGTGAAAGGCAGCTTTGGGTATTTGGATCCGGAGTATTACATTCGGCAGCGGTTGACGGAAAAATCTGACGTGTACTCTTTTGGGGTGGTGTTATTTGAGGTACTCTGTGCCCGTTCTCCTCTGATCCATAGCGAAGAAACCGAACAGGTGTCACTAGCTAATTGGGCCAGATATTGCTGCCAAAATGGGATAGTGGCGGAGATTGTGGATCCCATATTAAAGGGGAAGATCGCTCCCGATTGTTTAACCAAATTCTGTGAGATTGGGGTGTGTTGTTTGTCACAAGAGGGGATGCAGAGGCCTTCCATGAACGATGTCGTTTTGATGCTGGAGTCTGTACTGAAACTGCAAGAGAGTGCCGACGAATACGAAACAGAGGAAGATATTGACCGTGTGTTTGATGCCGGAGAGCACCGCAATAGTTACAAGGACAACGATAAGTTTATGTTGGAGCTTTTTTCTGAGATCGTCGACACGAAGCCTCGTTGA 2463 0.4929 MRFKAVIFFLLHLFSHLQAYTPVDNFTISCGSSGTSYDGQRTWTGDTGSVLLTNEDATVSAKATTTQSPSTNQVPYATARLSHSQFSYSFSFSTGGPKFLRLFFFPASYPSFPRTHASFSVHSNQFILLQDFNASLNADAENKEVIFKEYIVFVEEGQSLILIFTPSQSNSYAFINGIEVLSMPNNLYYTSANDTGFTNVGNTTPYVLATGFAMQTEYRIEVGGQEISPQNDTGLFRKWAGDDETYFVKQNPGLSAVADTKMNITVSPDYVAPEALYRTSRSMGTNATLNQISNLTWEFPVDSGFTYLLRLHFCEFEPDIKEVGDRVFFIYIASQLAERRADVMMWSEKRKGFGVYKDYAVFISKNDYQKKVNLSLQMHPYGDETKYSSAFLNGLEIFKISDPRSNNLAGPNPIETPQEKGNRRNRGRIIGITAGTVSGVVFISLVVSFVLLSTNFKWSALLFPMTKSTKYHNFSLPSDQCRRFSFVEIKAATKNFDNAFIVGDGGFGHVYKGYIDDNSVPVAIKRLRQGSQQGASEFVNEIQMLSQLRHRHLVSLIGYCCDNKEMILVYEFMGRGNLREHLYGTDNPCLSWKQRLKICIGAARGLSYLHSGAKHMIIHRDVKTTNILLDEKWVAKVSDFGLSKMGPNEMSKAHVSTAVKGSFGYLDPEYYIRQRLTEKSDVYSFGVVLFEVLCARSPLIHSEETEQVSLANWARYCCQNGIVAEIVDPILKGKIAPDCLTKFCEIGVCCLSQEGMQRPSMNDVVLMLESVLKLQESADEYETEEDIDRVFDAGEHRNSYKDNDKFMLELFSEIVDTKPR 820
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun4g00821 820 Gene3D Transferase(Phosphotransferase) domain 1 573 798 - -
Viun4g00821 820 ProSiteProfiles Protein kinase domain profile. 496 772 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun4g00821 820 Pfam Malectin-like domain 28 400 IPR024788 -
Viun4g00821 820 FunFam FERONIA receptor-like kinase 25 184 - -
Viun4g00821 820 Gene3D - 212 401 - -
Viun4g00821 820 Gene3D - 25 184 - -
Viun4g00821 820 CDD STKc_IRAK 502 769 - -
Viun4g00821 820 ProSitePatterns Protein kinases ATP-binding region signature. 502 525 IPR017441 GO:0005524
Viun4g00821 820 FunFam receptor-like protein kinase FERONIA 463 572 - -
Viun4g00821 820 Gene3D Phosphorylase Kinase; domain 1 480 572 - -
Viun4g00821 820 FunFam Receptor-like protein kinase FERONIA 573 789 - -
Viun4g00821 820 FunFam FERONIA receptor-like kinase 212 401 - -
Viun4g00821 820 SUPERFAMILY Protein kinase-like (PK-like) 480 773 IPR011009 -
Viun4g00821 820 SMART serkin_6 496 772 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun4g00821 820 ProSitePatterns Serine/Threonine protein kinases active-site signature. 617 629 IPR008271 GO:0004672|GO:0006468
Viun4g00821 820 Pfam Protein tyrosine and serine/threonine kinase 502 766 IPR001245 GO:0004672|GO:0006468
Viun4g00821 820 PANTHER OS03G0124300 PROTEIN-RELATED 6 453 IPR046957 GO:0004672
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun4g00821 Viun-Chr4 6495342 6498164 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun4g00821 20 805 Receptor kinase-like Gene Family AT3G51550 47.292 0.0 697
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Viun4g00821 Malectin_like 5.7e-39 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun4g00821 - - vra:106770147 1155.97