Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun4g00816 ATGGAGGAGATGCTTCGTCAGAACTCCCTTTCACTCCAAAAGCCGCTGCCGTTGCCGGTGACAATAGAACCTACAACTGCGACTACAAAAGGGGGTTTGGCTCTCAGTCCAACGAACCTTCCTGTCTCCTCTGTGCTTCTCAGCAACCACTACAAGCTTATAGTAAATCAGAACATTAAGCCTTCACAATACGACTTCACCCTTATAATGAGGTTCAACAGTGTCACCATCTTCAAATTCTTCCTCCACCTCTCTACACTCTTTACGCACCTCCAAGCTTACACCACAGTCAACAATGTCACAATCAGTTGCGGCACCACTGGAACATCCTACGACGGTGAAAGAACATGGACAGGGGACACAGGTTCAATGTTCTTCTCTAATCAAGACAACACCGTTTCCTCCAACCCAACAACACCACAACCTAATTCCACCCTTAAGGTACCCTACAACACAGCACGTGTGTCTCGTTCCCAATTCAATTATTCCTTCCCCGTAACCCCAGGCTCCTATTTCCTTCGCCTCTTCTTCTACCCAGCTTCTTACCCTTCCTTTCCCCGTACACAAGCATCTTTCACCGTTCATTGCAACCAATTCACACTCTTCTACGGTTTCAACGTCAACGCGGAAGACACGGAATTCATCTTCAGAGAGTACGTGGTCAACGTTCACAACGGTGAGACACTCAACCTCAGCTTCACTCCCTCACAACCTAACTCCCACGCTCTCATCAACGGAATCGAGGTATTTTCTATCCAAAGCGATCTCAATTACACCACACCACATGGTGCGGACTTCAAGCTCGTCGGAACCGATGCCTCGTACAGCGTTACAACCGACACTGTTCTGCAGACAGAGTATAGGATCAAAGTAGGAGGTCAAGGAATTTGGCTGCCAAAAGACATCGGTTTGTTCAGAAACTGGACCGACAAAGACGAACATTATTTAATTGAAGAAGAAAATTGTAGCAGTAATGATCTCGCTGGCGACGTGTATGGTAAGATGAACATAACCTTGAACCATGGTTACGTGCCATCCAAGGAACTGTACAGAACAGCGTGTATCACGGAGAGATCTAAGTTGACTTGGGACTTCCCCGTTGACTCTGGCTTCTACTACTTGGTCAGGCTCCATTTTTGTAAACTTGACCAGAACATTACTGACATCGCTGACAGGTTGTTCTGCATTTACATAGGTAGCGACCTGGCTGAGGATCACGCTGATGTTATGAGATGGAGCAACCAACATAAAGGTTTACCCGTGCAGAGAAATTTTGTCGTTTTGATTCCCAAAATGGATACTCAGAAAATGGTTAGTCTCTCGCTCCAATTGCATCCTTGTTTGAATTCGAGCATTCCGTGCTTGAGCGGTCTCGAGATCTTCAAAATCAGCGACTCCAACAACCTCGCCAGACCTAACGTGCAGAACGATCTTGCAGTCGGAAAGAGAAGGAACGTCTTATCAATCGGAAAAAGCACGAATTACATCACAAAACATAAAATTATCATAGCAGGGGTGGTATTCGTCTTGGTCTCGTTTCTTGGTTTCGCCGTCGTTTGGTGTGTAATATCCAAGTTCAATTTATGCTCGTTCTCAACCAAAGTACACCACCAACTGTCAACCAATTCACACGAACTGTCAACCAACACGCTCATCTGCCGGCGCTTCTCCCTCGTGGAGATCAAAGCCGCCACCAACAACTTCGACGACGCTGCCGTCGCCGGCGTCGGGGGATTTGGCCACGTGTACAGGGGCATCATCCGCAGAATTTTCATGCCGGTGGCTCTCAAGCACTTCAGACCGGGTTCAAATGGCCCTGCAAAGTTCCTGAACGAGATGGAGGTGGCTATCAAGCGCCACAAACCGGGTTCAAAGCAGGGCGCTGAAGAGTTTCTAAACGAGATCGAGTTGCTCTCGCAGCTCCGCCATCGCAATCTTGTTCCTCTCATCGGTTACTGCAACAGCAAGGAGGAGATGATTCTGGTCTATAGTTTCATGGCACGTGGCAACCTCCGGGACCATCTATATAACAGCGACAAGCCTCAGTTGCCATGGAAGCGACGCTTGCAGATTTGTATCGACGCAGCGCAGGCGCTTCACTACCTCCATAGTGGCGCCAAAGCATACACGATCATCCACAGCGACGTGAAAACCACGAACATCTTGTTGGATGAGGAGTGGGTGGCCAAGGTTTCGGATTTTGGGCTTTCCAGAATTGGGCCCATGGTTGAGTCCAAGGCCCATGTCGGCGACACCGCCATGAAGGGAAGCTTTGGGTATATAGATCCAGAGTATTATAAACGGCAATATTTGACGGAAAAGTCTGACGTGTACTCTTTCGGGGTAGTGCTGTTTGAGGTACTGTGCGCTCGTCCGCCACTGATCCGCACCGCGGATCCGATGCAAGAGTCGCTTTGTCATTGGGTTAGGTATTGTTACCAAAATGGGACAATGGCTCAGATATTGGACCCCACGTTGAATGGGAAGATCGCGCCCAAATGCTTTAGAATGTTTTGCAAGATTGGGGTGAGTTGTTTGTCGGAAATTGGGACGCAGAGACCGTCCATGAATGACGTGGTTGGGAAGCTTAAGTATGCTCTGCAACTACAAGAAATTGCAGATATTAGCGAGGCGCATTCTAATACTAAAATCCCATTGTCTGTTTAG 2667 0.4814 MEEMLRQNSLSLQKPLPLPVTIEPTTATTKGGLALSPTNLPVSSVLLSNHYKLIVNQNIKPSQYDFTLIMRFNSVTIFKFFLHLSTLFTHLQAYTTVNNVTISCGTTGTSYDGERTWTGDTGSMFFSNQDNTVSSNPTTPQPNSTLKVPYNTARVSRSQFNYSFPVTPGSYFLRLFFYPASYPSFPRTQASFTVHCNQFTLFYGFNVNAEDTEFIFREYVVNVHNGETLNLSFTPSQPNSHALINGIEVFSIQSDLNYTTPHGADFKLVGTDASYSVTTDTVLQTEYRIKVGGQGIWLPKDIGLFRNWTDKDEHYLIEEENCSSNDLAGDVYGKMNITLNHGYVPSKELYRTACITERSKLTWDFPVDSGFYYLVRLHFCKLDQNITDIADRLFCIYIGSDLAEDHADVMRWSNQHKGLPVQRNFVVLIPKMDTQKMVSLSLQLHPCLNSSIPCLSGLEIFKISDSNNLARPNVQNDLAVGKRRNVLSIGKSTNYITKHKIIIAGVVFVLVSFLGFAVVWCVISKFNLCSFSTKVHHQLSTNSHELSTNTLICRRFSLVEIKAATNNFDDAAVAGVGGFGHVYRGIIRRIFMPVALKHFRPGSNGPAKFLNEMEVAIKRHKPGSKQGAEEFLNEIELLSQLRHRNLVPLIGYCNSKEEMILVYSFMARGNLRDHLYNSDKPQLPWKRRLQICIDAAQALHYLHSGAKAYTIIHSDVKTTNILLDEEWVAKVSDFGLSRIGPMVESKAHVGDTAMKGSFGYIDPEYYKRQYLTEKSDVYSFGVVLFEVLCARPPLIRTADPMQESLCHWVRYCYQNGTMAQILDPTLNGKIAPKCFRMFCKIGVSCLSEIGTQRPSMNDVVGKLKYALQLQEIADISEAHSNTKIPLSV 888
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun4g00816 888 Gene3D Phosphorylase Kinase; domain 1 529 665 - -
Viun4g00816 888 Pfam Malectin-like domain 102 463 IPR024788 -
Viun4g00816 888 SUPERFAMILY Protein kinase-like (PK-like) 553 861 IPR011009 -
Viun4g00816 888 SMART serkin_6 568 866 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun4g00816 888 FunFam Receptor-like protein kinase FERONIA 666 884 - -
Viun4g00816 888 Gene3D Transferase(Phosphotransferase) domain 1 666 884 - -
Viun4g00816 888 PANTHER OS07G0166700 PROTEIN 552 870 IPR045272 GO:0004714|GO:0006468
Viun4g00816 888 ProSitePatterns Serine/Threonine protein kinases active-site signature. 711 723 IPR008271 GO:0004672|GO:0006468
Viun4g00816 888 Gene3D - 98 254 - -
Viun4g00816 888 Gene3D - 282 463 - -
Viun4g00816 888 FunFam FERONIA receptor-like kinase 99 253 - -
Viun4g00816 888 ProSiteProfiles Protein kinase domain profile. 568 866 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun4g00816 888 Pfam Protein tyrosine and serine/threonine kinase 575 863 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun4g00816 Viun-Chr4 6450108 6453616 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun4g00816 94 874 Receptor kinase-like Gene Family AT3G51550 42.615 0.0 572
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Viun4g00816 Malectin_like 3.9e-29 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun4g00816 - - vun:114180426 1786.54