Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun4g00814 ATGGCAATCACATTAAAGATCACAACTTTTCAAGTCAAGTCCACAAATTTGACCACAGAGTTTGAATCAAGCCATCCATTCATAGCAGCAAGAACAATGCATCTTCCATTCCACCCCAAAATGGCTCCTTTTCCCTGTCTTCCATTTTTCACCACCACAAAATCCAAAACCACAAGCAACTCTAATCCAATAGAACAGCTCTGTCACCGCTTCTCTTTTTCTGAGCTTCAAGCAGCCACAAATGGGTTCATGCCGAGTTTAATTGTCAGTGGAGAAGGTCAATGCAAGGTCTACAAAGCCCACCTCAAAGGCCATGGAGACGTAGCCATCAAACACTTCGAGATTAAAAGCCCAGATCGTGATATAGAATTCAGGGTCGAAGTCGAGATTCTGTGTCAACTACACCACCCAAATGTTGTTCCTTTGGTTGGTTTCTGTGAGCACAAAAATGACAAGTTTGTTGTGTATGATTATGTCTCCAATGGAAGCCTCCATGATTGTTTGCATGGCACCAACAAAAACAGTGCTGTTCCCTTGTCGTGGATACAAAGACTTAACATCTGCATCGGGGTGGCTCGTGGACTGCACTACATTTACTTTGAAACCAAGATACCCATCATGCACCGTGCTGTGAAATCAAGCAACGTTCTTTTGGACCGTAATCTGGTGCCTAAAGTGGCGGATTTTGGACTTTGCAAGAAGCACCCGCAAGAGGAGTCAAGGCCAAAGCCACCAAGAGTTGAGTTGAGGGAGAACTTGGAGGTTAGTTTGGAATACATGGAGCCTGAGTATTTTATGACTGGAAGGTTATCAAAGAAATTTGATGTGTACTCTTTTGGGGTGGTAATGTTAGAGATTGTGTGTAGGAAGGAAGCATGTTTTTTAACCCCAGGTGGAGATTGTGAGTACCTTGTTAAGTGGGCTTTTGATGATGAAAGGAAGGGGGTTCTTGAGAAGATTGTTGATCCATCTCTTATTGGAAAAATAGCACCTTCTTGTTGGGAAGTGTTCATTGAGATTGTTCAGAGATGTTTGGCTTCAGTTGAAGAGAGGCCAACGATGGGTGAAGTGGTTATGATTCTTGAAAATGCATTTTTGTTGCAAGAGAGAGCACATGTGTGA 1122 0.4296 MAITLKITTFQVKSTNLTTEFESSHPFIAARTMHLPFHPKMAPFPCLPFFTTTKSKTTSNSNPIEQLCHRFSFSELQAATNGFMPSLIVSGEGQCKVYKAHLKGHGDVAIKHFEIKSPDRDIEFRVEVEILCQLHHPNVVPLVGFCEHKNDKFVVYDYVSNGSLHDCLHGTNKNSAVPLSWIQRLNICIGVARGLHYIYFETKIPIMHRAVKSSNVLLDRNLVPKVADFGLCKKHPQEESRPKPPRVELRENLEVSLEYMEPEYFMTGRLSKKFDVYSFGVVMLEIVCRKEACFLTPGGDCEYLVKWAFDDERKGVLEKIVDPSLIGKIAPSCWEVFIEIVQRCLASVEERPTMGEVVMILENAFLLQERAHV 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun4g00814 373 PANTHER OS07G0166700 PROTEIN 67 368 IPR045272 GO:0004714|GO:0006468
Viun4g00814 373 SUPERFAMILY Protein kinase-like (PK-like) 55 360 IPR011009 -
Viun4g00814 373 Gene3D Transferase(Phosphotransferase) domain 1 159 371 - -
Viun4g00814 373 Gene3D Phosphorylase Kinase; domain 1 48 158 - -
Viun4g00814 373 ProSiteProfiles Protein kinase domain profile. 73 366 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun4g00814 373 Pfam Protein tyrosine and serine/threonine kinase 95 360 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun4g00814 Viun-Chr4 6442477 6444034 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun4g00814 47 371 Receptor kinase-like Gene Family AT5G61350 39.577 7.06e-71 235
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Viun4g00814 PK_Tyr_Ser-Thr 1e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun4g00814 - - vun:114182620 758.059