Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun4g00810 ATGACCATCTTCACTTTCACCTTCATCTTATCACTCTTCTTCTTCCTCCTTCTACAAATCTCCACACACCTCCAAGCCTACAACCCAGAGGAAGTTTTCACCATCAATTGCGGCACCACCGGAAACTCCTCCGACGGTCAAAGAACGTGGACCGGCGACGCAGACACTAAGTACTTATCTTCCCAACATGCCACCGTTTCAGACAAGGCTACAACACAGTCTCCTTCCATCAATCAAATACCCTTCTCCACCGCACGCTTGTCCCGTTCCCAATTCAACTACTCCTTCCCAGTCTCCGCAGGCACCAAATTCGTTCGCCTCTTTTTCTACCCTGCAGACTACCCTTCCTTTCCCCGCACCCAATCATCCTTCACCGTTAAATCCAACCAATTTACTCTCCTCAACGATTTCAACGCCTCTCTCAACGCCGACGCTCAAGCCACCGACACTATTTTCAAAGAATACGTGGTCAACGTCAACGACGGTGAGAGGCTTATCCTCACCTTCACTCCCTCGCATCCAAACTCATACGCTTTCATCAATGGAATCGAGGTGCTTTCCATGCCAACCGATTTATATTACACAGTAAATGACACAGGCTTCAAGTTCATCAACAGTAGCACGCTGTACAGCGTTGGAACCAGCTTTGCTCTTCAGACTGAGTATAGAATCAAAGCCGGAGGACAAGAAATCCCGCCACAAAACGACACCAGTTTGTTCAGGGATTGGGCTGACGAACAAGGCTATTTTGTTAAATACAATCCAAAGAATAATGATCTACCAGGTGACATGGATGGGAAAATGAACATAACAGTGAATCCCGATTACTTGGCACCAAAGGAACTGTTCAGAACAGCGCGTAGCATGGGCACAAACGCCACTCTGAACAAAATGAGCAACCTCACTTGGGAGTTCCCCGTTGATGCTGGCTTCACTTACGTTCTCAGGCTCCACTTTTGCGAGCTTGATCCCAATATTAATGACATCGGTGACAGGCAGTTCTACATTTACATAGCGAGACAGTTGGCAGAAACACGTGCAGATGTAATGAAATGGAGTCAGAAACAAAAAGGTTTAGCTGTGCACAGAAACTACGCCGTTTTGATTCCTGGGAATGGTGGTCAGAAAAAGTTTAATCTCTCGCTTCAAATGCATCCTTACGAAAAAGGTGTGGATACGAAATACAGCGACGCCATCCTGAACGGTCTCGAGATCTTCAAAATCAGTCAAGCTGACTCAAACAACCTAGCCGGACCCAACCCTGACCCGGTTCAGACTCCACAGATTCCCGGTCAAAACAGAAAGACCAGCAGCGGAAGCTCAACGACGATTATTGGCGCCATAGCAGGGGTGGTGTCTGGCATCGTTTTGATCTTGATAATCGTTTTCCTTGTCGTGTTTTTCAGACACAAGAGAACCACAAAGCCAAAAGACTACAACAAGTCAAAGTCTTCCGCGACTTCCAAGTGGGGTCCACTCTCCTTTACAACGACCAAGTCAACTACCACGAACTCCTCTCTACCGTCCGATCTCTGCCGCCACTTCTCCCTGGTGGAGATCAAAGCCGCCACCAACAACTTCGACAACGTCTTCATCGTCGGCGCCGGGGGATTTGGCCATGTGTACAAGGGCTACATCGACGGCGGTTCCACCCCGGTGGCCATCAAGCGCCTCAAACCTGGTTCACAGCAGGGCGCGCACGAGTTCATGAACGAGATCGAGATGCTCTCGCAGCTCCGCCATCTTCATCTCGTGTCCCTAATCGGATACTGCAACGAGATGAACGAGATGATCCTCATCTACGACTTCATGGCACGTGGCACCCTACGCGACCATCTCTACAACACGGACAACCCCGCTATCCCGTGGAAGGAGCGCCTGAAGATCTGCATCGGCGCCGCGCGTGGGCTGCACTATCTCCACACCGGCGCGAAGCACACGATCATCCACCGCGACGTGAAAACCACGAACATCTTGTTGGATGATAAGTGGGTGGCCAAGGTTTCAGACTTCGGGCTTTCCCGAATTGGGCCCACGGGCATGTCAAAGGCCCATGTGAGCACCGTGGTGAAGGGCAGCATTGGGTATCTAGACCCAGAGTATTACAAACGACAGCAATTGACGGAAAAGTCTGACGTGTACTCGTTCGGCGTGGTGTTGTTTGAGTTACTCTGCGCTCGTCCGCCTCTGATCCGCACCGCGGAGAAGAAACAGGTGTCACTGGCTGATTGGGCGAGATACTGTTACCAAAACGGGACCATTGCGCAGATTGTGGACCCCACGTTGAAGGGTCGGATCGCACCAGAGTGCTTGAGGAAGTTCTGCGAGATTGGGGTGAGTTGTTTGTTGGACGATGGAACGCAGAGGCCGTCGATGAACGACGTCGTTTGGATGCTGGAGTTTGCGTTGCAGTTGCAAGAGAGCGCGGAACAGCGCGATAATGATAACGTGGTTGGTGGTGAGCCGGGTAATGAACGAAGAGAGGAAGGTAACGAAGATTTGTTTAGTAGTGGAACAAGTGTGGGTCAGGTTTCGGATTTTAACAAGAGTAGTGGAACGAGTGTGGTGAGTGTGAGTACCAGCAGCGAGGAGCTTAGTAGCAGCTATAAAGAGAGTGATAGATTAATGTCTGGGACGGTTTTCTCTGAAATTGTTGACCCAAAACCACGTTGA 2673 0.5024 MTIFTFTFILSLFFFLLLQISTHLQAYNPEEVFTINCGTTGNSSDGQRTWTGDADTKYLSSQHATVSDKATTQSPSINQIPFSTARLSRSQFNYSFPVSAGTKFVRLFFYPADYPSFPRTQSSFTVKSNQFTLLNDFNASLNADAQATDTIFKEYVVNVNDGERLILTFTPSHPNSYAFINGIEVLSMPTDLYYTVNDTGFKFINSSTLYSVGTSFALQTEYRIKAGGQEIPPQNDTSLFRDWADEQGYFVKYNPKNNDLPGDMDGKMNITVNPDYLAPKELFRTARSMGTNATLNKMSNLTWEFPVDAGFTYVLRLHFCELDPNINDIGDRQFYIYIARQLAETRADVMKWSQKQKGLAVHRNYAVLIPGNGGQKKFNLSLQMHPYEKGVDTKYSDAILNGLEIFKISQADSNNLAGPNPDPVQTPQIPGQNRKTSSGSSTTIIGAIAGVVSGIVLILIIVFLVVFFRHKRTTKPKDYNKSKSSATSKWGPLSFTTTKSTTTNSSLPSDLCRHFSLVEIKAATNNFDNVFIVGAGGFGHVYKGYIDGGSTPVAIKRLKPGSQQGAHEFMNEIEMLSQLRHLHLVSLIGYCNEMNEMILIYDFMARGTLRDHLYNTDNPAIPWKERLKICIGAARGLHYLHTGAKHTIIHRDVKTTNILLDDKWVAKVSDFGLSRIGPTGMSKAHVSTVVKGSIGYLDPEYYKRQQLTEKSDVYSFGVVLFELLCARPPLIRTAEKKQVSLADWARYCYQNGTIAQIVDPTLKGRIAPECLRKFCEIGVSCLLDDGTQRPSMNDVVWMLEFALQLQESAEQRDNDNVVGGEPGNERREEGNEDLFSSGTSVGQVSDFNKSSGTSVVSVSTSSEELSSSYKESDRLMSGTVFSEIVDPKPR 890
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun4g00810 890 FunFam Receptor-like protein kinase FERONIA 499 603 - -
Viun4g00810 890 Pfam Protein tyrosine and serine/threonine kinase 533 797 IPR001245 GO:0004672|GO:0006468
Viun4g00810 890 Gene3D - 217 410 - -
Viun4g00810 890 Gene3D - 28 189 - -
Viun4g00810 890 MobiDBLite consensus disorder prediction 475 504 - -
Viun4g00810 890 SUPERFAMILY Protein kinase-like (PK-like) 502 802 IPR011009 -
Viun4g00810 890 FunFam Receptor-like protein kinase FERONIA 604 818 - -
Viun4g00810 890 ProSiteProfiles Protein kinase domain profile. 527 802 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun4g00810 890 ProSitePatterns Serine/Threonine protein kinases active-site signature. 648 660 IPR008271 GO:0004672|GO:0006468
Viun4g00810 890 FunFam FERONIA receptor-like kinase 216 409 - -
Viun4g00810 890 MobiDBLite consensus disorder prediction 810 890 - -
Viun4g00810 890 MobiDBLite consensus disorder prediction 834 875 - -
Viun4g00810 890 MobiDBLite consensus disorder prediction 416 439 - -
Viun4g00810 890 Gene3D Transferase(Phosphotransferase) domain 1 604 822 - -
Viun4g00810 890 Pfam Malectin-like domain 35 408 IPR024788 -
Viun4g00810 890 Gene3D Phosphorylase Kinase; domain 1 491 603 - -
Viun4g00810 890 PANTHER OS03G0124300 PROTEIN-RELATED 4 481 IPR046957 GO:0004672
Viun4g00810 890 MobiDBLite consensus disorder prediction 480 504 - -
Viun4g00810 890 SMART serkin_6 527 802 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun4g00810 890 FunFam FERONIA receptor-like kinase 32 189 - -
Viun4g00810 890 ProSitePatterns Protein kinases ATP-binding region signature. 533 556 IPR017441 GO:0005524
Viun4g00810 890 CDD STKc_IRAK 533 800 - -
Viun4g00810 890 CDD TM_EGFR-like 438 472 - -
Viun4g00810 890 MobiDBLite consensus disorder prediction 819 833 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun4g00810 Viun-Chr4 6426614 6429889 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun4g00810 27 890 Receptor kinase-like Gene Family AT3G51550 51.233 0.0 810
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Viun4g00810 Malectin_like 9.6e-39 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun4g00810 - - gsj:114381619 1365.52