Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun4g00797 ATGTCTAAAAAGGTCTTCACATCACTGAAGGATGAAAACCCAGAGTTGCAGAAGCAAATTGGGTGCATCAGTGGTTTTTTTCAGCTCTTTGACCGTCACAGGTTCCTCACAGAGCAACAAGGTGGAACAAGGAACCAAGTGAAAGAGGTGAATAACACAACTCAAAAGGCAACGGGAAAGAATGTGAAGGTTGCAGGAGAGAATCAGCAATTCTCCACAGAGTCATCAAGAACTTCAATGTCTTCGTCTTCACGTTCATCTAGCATGTCATCGCTCGAGTTCAACAGGGCAATTCAGATAGAACCACCATCAATAATAAGTCCAATGAAGATTCCAGAGAACTCAAATCCAGAAGTAGCAGTGAAGCAACATGGCAACCAAGGCCCTCAATCCCTTGATTTCTATGACATTGTGAAAGAGTCAATGCATAGAGATGTTCAAGGATTGTCAATAAAAGTTGTGGCTAAAGAGGAAAAGAAAGGTAGAATCTTGAAACATGTTGATTCTCCCAGGCCTTTGGAGCCGCCAAAACATGTAAACATGGTTGCTTGGGATTCACCGAGACTCTCGTATGATGGGAGGGACACACAAGATTCATTAAAATCTGCTACAAAGGCTAAGGAACTCCCCAGGCTTTCCTTGGACAGCAGAGAAGGATCCATTAAAAGCTTCAATGAAGGAACAAAATGTCTTGGCCTTCTGAAGGGTCTACAGAAAGGGTATGGTAGCTCTGGCACAATGATTAAGCAGCTGCAGGAACCAGAAACTTCTAGAAGATCATCCAGTGTTGTAGCAAGGTTGATGGGACTTGAAACCTTCCCAGACTGCACAGAAACTTGTACCAGTAAAAATGAGTCAAATGCAGAACCTAGCACAAATGATGAGTACAAACAACACCAGATTGCAGCATCAATGAAAGGGTCTAGTTTTCTTCAGTTTAGGAGGGATGCTTCAATCCTGAATGTGACACCGTATTCAAGGTTTTCCCTAGAACCTGAAGTGAATCTTCAGCAAATACAGACTTCAAAGAGAAGTGAATCTGCAGCAAAAGCATCAAACCAATCACTCTCTGTATACGGGGAGATTGAAAAGAGGATTGCAGATATAGAGTTCAAAAACTCTGGAAAGGATCTCAGAGCGCTTAAACAGATTCTTGATGCTATGCAGAGATATAAAGAATCATTTGATATTACAAGGGACCAGGCTTCAAATTCTCTATCTGACAATAGGAGTAATAGCAGTCTGAGTGAAAGCTCTGTGGTTAAAAGCCCAAGAATTCGGCAGAAGGGGCCGGCATCCACCACTTCTGAGATGAGAAATTCAACACAGGGTTGTAAGTCACCAATTTTCACCATGAAACCAGCAAAATCTGCAAGACAAACCAGCAAGTTTGGTTCTGCTAATCCTGCAAATGGAGTAGTGGGTGACAAGCTTCACAGGAAAACAGCAAAGGATAAGAGCAACAACAAGATGAGAACATCAAAATTGTTGCAATCGCCAAAAGTTCCTCAAGTAATCAATGGGGAAAATGGCACCAACTCCAGCAAGAGTCCAAGACTACAAAAGAAGTTTGGTTTGGAGAGGCGCTCACCGACAACTAGCCCTTCATCAGAATCATGCAGTAACAGAAAACAGCAGAATAGACAAAAATTCAGCGAGACCAAAAACCAAAGGGGGGATTTTAAGCATGAAGTTGGCGTAGAAGTCATTCACATTGATCAAAATAATGCAGCAGAAGATTTGAACAAGGAAAGCTTTCAAGCTGAGAAAATAGTTACAGCGGAGCAACCAAGTCCTGTGTCTGTTCTTGATGCTGCTTTCTACAGTGAAGAACCACCTTCACCAGTCAAAAAGAAATCAGACATCACAAGAGATTTAGATGATGCTCTTTCTGATAGCAGTGAGGAGAACTCAGAAGATCTTCCACTTTTATCCTACAATGCAAAAGCCAACTTCAGCAGCAGTGATACTGACTTGAGAACTCAAAATTTGGTTCAAATTCTCCATCAAATTGACTCCAATGATGAGAGATTTACCAGTTTCAGAGACTATAATGATCCTGACCATAAATATATATCAGAAATACTGTTAGCATCAGGGCTTCTCAGCAGTCCAAGCTCTTGCTACGATTTTCATTCATCAAGTCACCCAATAAACCCAAAGTTGTTCCTTGCACTAGAGCAAATCAAGACAAACAAGAACTGTTTCAACATTGAATACAATGCCAAGAAAATTTCTGGGCCAAGTAGTCCTGAGAAAATGCAAAGAAAGCTAGTATTTGATGTTGTTAGTGACATTCTAGCTCAGAAACTGATATTGGAAAGTTCTACTCCGTGGTGCGGATCATATCAGCCAACAAGTAGAAAAATAAAAGGGAACCTTCTGTTGGATGAGCTTTGCACAGAAATTGATAAGTTGCAACATAAAAATAGGAATGTGAAACTTATTAACGAGGATGAGAACATGACAAGCCTCCTGTGGGAAGAGTTGATGCAGTGTCCCACAATTTACACAAACAGTTACATGGAAATTCCAAATGTTGTGTTGGATATTGAACGGTTGATCTTCAAAGATTTGATAACTGAAGTTGTGAGAAGTGAACTAGCTAACCAATCTGGTAAGCACTGCAGAAAACTGGTGTTTTGCAAGTAG 2652 0.4091 MSKKVFTSLKDENPELQKQIGCISGFFQLFDRHRFLTEQQGGTRNQVKEVNNTTQKATGKNVKVAGENQQFSTESSRTSMSSSSRSSSMSSLEFNRAIQIEPPSIISPMKIPENSNPEVAVKQHGNQGPQSLDFYDIVKESMHRDVQGLSIKVVAKEEKKGRILKHVDSPRPLEPPKHVNMVAWDSPRLSYDGRDTQDSLKSATKAKELPRLSLDSREGSIKSFNEGTKCLGLLKGLQKGYGSSGTMIKQLQEPETSRRSSSVVARLMGLETFPDCTETCTSKNESNAEPSTNDEYKQHQIAASMKGSSFLQFRRDASILNVTPYSRFSLEPEVNLQQIQTSKRSESAAKASNQSLSVYGEIEKRIADIEFKNSGKDLRALKQILDAMQRYKESFDITRDQASNSLSDNRSNSSLSESSVVKSPRIRQKGPASTTSEMRNSTQGCKSPIFTMKPAKSARQTSKFGSANPANGVVGDKLHRKTAKDKSNNKMRTSKLLQSPKVPQVINGENGTNSSKSPRLQKKFGLERRSPTTSPSSESCSNRKQQNRQKFSETKNQRGDFKHEVGVEVIHIDQNNAAEDLNKESFQAEKIVTAEQPSPVSVLDAAFYSEEPPSPVKKKSDITRDLDDALSDSSEENSEDLPLLSYNAKANFSSSDTDLRTQNLVQILHQIDSNDERFTSFRDYNDPDHKYISEILLASGLLSSPSSCYDFHSSSHPINPKLFLALEQIKTNKNCFNIEYNAKKISGPSSPEKMQRKLVFDVVSDILAQKLILESSTPWCGSYQPTSRKIKGNLLLDELCTEIDKLQHKNRNVKLINEDENMTSLLWEELMQCPTIYTNSYMEIPNVVLDIERLIFKDLITEVVRSELANQSGKHCRKLVFCK 883
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun4g00797 883 MobiDBLite consensus disorder prediction 610 640 - -
Viun4g00797 883 MobiDBLite consensus disorder prediction 401 468 - -
Viun4g00797 883 MobiDBLite consensus disorder prediction 401 559 - -
Viun4g00797 883 MobiDBLite consensus disorder prediction 477 491 - -
Viun4g00797 883 Pfam Domain of unknown function (DUF4378) 688 862 IPR025486 -
Viun4g00797 883 MobiDBLite consensus disorder prediction 527 547 - -
Viun4g00797 883 PANTHER LONGIFOLIA PROTEIN 1 559 IPR033334 GO:0051513
Viun4g00797 883 MobiDBLite consensus disorder prediction 492 520 - -
Viun4g00797 883 Coils Coil 796 816 - -
Viun4g00797 883 MobiDBLite consensus disorder prediction 614 631 - -
Viun4g00797 883 MobiDBLite consensus disorder prediction 40 92 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun4g00797 Viun-Chr4 6210558 6215417 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun4g00797 132 878 TRM (TON1 Recruiting Motif) Superfamily AT1G74160 29.322 1.99e-67 240
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun4g00797 - - vra:106774015 1412.51