Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun4g00795 ATGATCAATAGTACAAAAGAAGCAGATTTTCCACTGAAACAGGAAGGTGTTTCTTCGAGTGATCATGAAAAGGCAAAGGCTTCATCGAGTTCATCTTCTCAATGGCTGAAACTGAAGGATCCAAGGATTGTTCGTGTGTCTCGAGCCTTTGGAGGAAAAGACAGGCACAGCAAAGTGTGCACGGTGAGAGGGCTGAGAGATAGGAGAGTGAGGCTTTCAGTGCCAACAGCGATTCATCTCTATGATCTCCAAGATAGGCTTGGACTGAATCAACCCAGCAAGGTTGTTGATTGGTTGCTGAATGCAGCAAAACATGAAATCGATGAACTTCCACCACTTCCAATTCCTCCAGGTAACTTCACCCTTGGTTATCCATCTCTTGTTGCTTGTAATGAAGGTTCAGGCCAAAACACAAACACTTTGTGGAAATCAAAGTCAGGAGAAATGGTTAGTGATAAAGCAAATTGGATAAACAGAAGTGAAGATGATACTAATAATAATACTAATACTAATACTGATACCAATGCTAATACTGCTAGTGATTGTGATAATAAACACTGTCATGGTGCACATGTTTTTCCAAATAATCTCTTGCCAAGACCGAACCATCCTTCGTTTTTGGGATTGATGAACACCATGCCATCACTTGGTTACCAATGGGAGGCTAGTTCAGGTGATGTTGCTCAATGGGCAAACCATGGATTTGTTAATCAAACAGATATACACAGCATTAATGTAGTTCCAATCCCATCATCAACTTTGGCTCTATCAACTGGGAACACTAGTACTCCTCAGATTTTGGTGTGTCCTTCTGGAGCAACACAGCCATATTTCCCTTCACATGTTGCAGCAATGGAGATGAATGCAAGACAAATCAACCACTATCAGATGCTCACTTCAGGTTCTCAAAATCTCTTGGCGAATTCTCTCAATCCATCATCACAACAACTCATGACCCAATCTGGGAAAGTGCCATTCAGCTTGGTTAGGCCTAAACTTTTTCATTCTCCTAACACCACTGAAACTCATCATCATCATCATCATCATCCACGTAAAGACCAGGATTTTCCTTCCAAGTCATGA 1083 0.4146 MINSTKEADFPLKQEGVSSSDHEKAKASSSSSSQWLKLKDPRIVRVSRAFGGKDRHSKVCTVRGLRDRRVRLSVPTAIHLYDLQDRLGLNQPSKVVDWLLNAAKHEIDELPPLPIPPGNFTLGYPSLVACNEGSGQNTNTLWKSKSGEMVSDKANWINRSEDDTNNNTNTNTDTNANTASDCDNKHCHGAHVFPNNLLPRPNHPSFLGLMNTMPSLGYQWEASSGDVAQWANHGFVNQTDIHSINVVPIPSSTLALSTGNTSTPQILVCPSGATQPYFPSHVAAMEMNARQINHYQMLTSGSQNLLANSLNPSSQQLMTQSGKVPFSLVRPKLFHSPNTTETHHHHHHHPRKDQDFPSKS 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun4g00795 360 ProSiteProfiles TCP domain profile. 52 110 IPR017887 -
Viun4g00795 360 Pfam TCP family transcription factor 52 174 IPR017887 -
Viun4g00795 360 MobiDBLite consensus disorder prediction 1 33 - -
Viun4g00795 360 MobiDBLite consensus disorder prediction 334 360 - -
Viun4g00795 360 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 12 352 IPR005333 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun4g00795 Viun-Chr4 6202144 6204590 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun4g00795 35 319 TCP Transcription Factor Family AT3G02150 41.638 8.93e-51 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Viun4g00795 TCP 5.4e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun4g00795 - - aprc:113867214 482.641