Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun4g00742 ATGGCCAATGAAAGTGGAGAATTACCAATGACCCCAGAAGTGACTAACTCACCCGGGGTTGAAAAAAGAAGGCATTTACCTGACAAAGCTAGTTCTGGAAGCAGTGTTGAAAAAGTTGTTCCTAATTATCTCAGAGCTTCAACAGGTTCTTGTCATGATTTTTGCAAATATGGTAAGAAACATGCGCATGAAGTGAAGGAAAGACGCTCTATACCTGATAGAGCTACGAGAAAACAGCTCCACCAAAGTTTACAAGGTAGTGTTGGTGGGATAACCGTATCAGTTGCTAGGCTCAGTGCATCTGTAGATTCCAAGCTGACAAAGATTTCAACAAGAAAACTGAAAGAATCAGTTGATTCCAAGATGGTTTCTGATACATCAGACACTCCTAAGCAGAAGCGGCCAACAAAGTCATTTGACAACCCAAAGGAATCACGGAACGAAGTTACGGTGAACCGGAGAAAATCAACGTTGGCCAAGGTTAATCCATCTCTCCTGAGGTGCCATACATCTCCTCCAATAAGACTAGAAATTTCTTCAATGAAGGAGGTCCAATCTCCATCAAAGTCTGCTTCCAAAAAGGTTGGAACTCCATCAAAATCAATATCTAGGAAAGTGGATTCTCCATCAAAACCAACTTCTAGGAAAGTGGAAGCTCAATCAAAATCAACTTCTAGGAAGGTGGAGGCGCCTTCAGGATCAATGGCCAATAAGATGGACTCTCCATTAAAACCTACTTTCAATGAGATGAGGAATCCCTCAAAACCAATCTCCAAGGTCAAAACTTCATCAAAACCATCTTCCAATGTGGTGAAAACTTCATCACAGATATCTTCTCTCAAAGGTAAAGAAGCAAATTTGTTTGAAAAACGTTTGCCTTCTTTAAATTTAAGCAATGTTAGGAGGAAGCAAATATCTTCCATGAATACCCCAGATGTCGATGTTGGTCAAATATATAATAAGATCAAGTTGGAAAAGGGGGCTACATCCTCCAAAGCAGGTTCAAAAAAACTGATGGCACCTCAGAAGGCTTTGTTATCCCCCAGAGCTTCCCTCAGAAGAGTTGCAAGTCTAAATTCAAGAAAGTTGAAGAGCCTGAAAATTGCATCTCACCTTAAGCATCAGCAGACTCCCAAAAAGGTTGAGCACGAGGAACACGACAACAACAACAACAATGAGGTAGAGGAAAAAACTTTGTATGTCATCAAGATGGAAAGTGAAAACAAACCCTTGCAATCTGATCAGAATGCTAGCTATGATGATGAATCATACATTCCTCAGTTGTTATCACCTAAGTCTTCGGTGTCCTCAATTTCCGAATCCTTTTCTGCAAAAGACCGAGAGGAATCTGAATATACAACTAGTGAATATGAGCAGAATGAGCAGGATGAGCAGGATTCTTTCTCAGGAAGCCATGAAGTTGAATGCATAGAGAAGGAGAAGACATTGGAAGATGAAAAGAAAAGCAAGAACACAAAGAATGTGGTGGCGTATTCCAAAAACAAGGACAACAAAGTGGTAAAATTGAAGTTCAGAAGGGGAAAAGTGGTTGAAAATCCAACTGAGATAAGTAGTCCAAGGAGGATCAAGTTCCGGAGAGGAAAAGTGCTGGGTGGGAGGGCCAGTGTTAAGGTTGACACCCGGAAAAGCTTTGAAAGACACGAAAGCTGTGCTGACAGCAATGGTGCTACAACTGCTCCAGAAAAGGTTATTTTAAGACATCAAGATATGCAAGACAAGAGAGATGCACAGGGACTATTCAATAATGTAATTGAGGAAACAGCAAGTAAACTAGCCGAAACTCGGAAGAGCAAGGTTAAAGCACTGGTTGGTGCCTTTGAAACTGTGATCTCTCTTCAAGAGAAAAAACCTTCTGTAAACACACTCAGCTGA 1893 0.4099 MANESGELPMTPEVTNSPGVEKRRHLPDKASSGSSVEKVVPNYLRASTGSCHDFCKYGKKHAHEVKERRSIPDRATRKQLHQSLQGSVGGITVSVARLSASVDSKLTKISTRKLKESVDSKMVSDTSDTPKQKRPTKSFDNPKESRNEVTVNRRKSTLAKVNPSLLRCHTSPPIRLEISSMKEVQSPSKSASKKVGTPSKSISRKVDSPSKPTSRKVEAQSKSTSRKVEAPSGSMANKMDSPLKPTFNEMRNPSKPISKVKTSSKPSSNVVKTSSQISSLKGKEANLFEKRLPSLNLSNVRRKQISSMNTPDVDVGQIYNKIKLEKGATSSKAGSKKLMAPQKALLSPRASLRRVASLNSRKLKSLKIASHLKHQQTPKKVEHEEHDNNNNNEVEEKTLYVIKMESENKPLQSDQNASYDDESYIPQLLSPKSSVSSISESFSAKDREESEYTTSEYEQNEQDEQDSFSGSHEVECIEKEKTLEDEKKSKNTKNVVAYSKNKDNKVVKLKFRRGKVVENPTEISSPRRIKFRRGKVLGGRASVKVDTRKSFERHESCADSNGATTAPEKVILRHQDMQDKRDAQGLFNNVIEETASKLAETRKSKVKALVGAFETVISLQEKKPSVNTLS 630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun4g00742 630 MobiDBLite consensus disorder prediction 1 37 - -
Viun4g00742 630 MobiDBLite consensus disorder prediction 111 153 - -
Viun4g00742 630 Pfam Plant calmodulin-binding domain 508 618 IPR012417 GO:0005516
Viun4g00742 630 MobiDBLite consensus disorder prediction 62 84 - -
Viun4g00742 630 MobiDBLite consensus disorder prediction 181 231 - -
Viun4g00742 630 MobiDBLite consensus disorder prediction 375 403 - -
Viun4g00742 630 PANTHER EMB|CAB62594.1 16 626 - -
Viun4g00742 630 MobiDBLite consensus disorder prediction 247 277 - -
Viun4g00742 630 MobiDBLite consensus disorder prediction 62 76 - -
Viun4g00742 630 MobiDBLite consensus disorder prediction 364 491 - -
Viun4g00742 630 MobiDBLite consensus disorder prediction 111 277 - -
Viun4g00742 630 MobiDBLite consensus disorder prediction 465 491 - -
Viun4g00742 630 MobiDBLite consensus disorder prediction 327 352 - -
Viun4g00742 630 MobiDBLite consensus disorder prediction 408 441 - -
Viun4g00742 630 SMART CaM_binding_2 505 618 IPR012417 GO:0005516
Viun4g00742 630 MobiDBLite consensus disorder prediction 547 567 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun4g00742 Viun-Chr4 5620257 5624165 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun4g00742 568 616 Calmodulin-binding Proteins AT2G38800 48.000 4.07e-06 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun4g00742 - - vun:114182359 1169.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun4g00742 4 5620257 5624165 Viun5g00510 5 3002909 3004855 PCT