Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun4g00736 ATGGCTGCGACAAAACCCCAACGCACTCCACAGGAAGTGGAGGACATTATCATCCGCAAAATCTTCCTCGTTTCCATAACCGAAATCGAGAAGACAAGCGCAACGGATTCAAGAATCGTGTATTTGGAACTAACAGCTGCGGAGATTCTCAGTGAAGGGAAGGAGCTTCGCCTCTCGCGGGATTCAATGGAGAGGGTTTTGATCGACCGTCTCTCCGGAGACTTTTCTTCCACCACCGGAGAAGCCAGTGAGACGCCGTTCCAGTACCTCATCGGATGCTACCACAGGGCGCATGAGGAGGGGAAGAAAATTGCGAACATGAAGGACAAGAGCTTGCGCTCGGAGATGGAGGCGGTGGTGAGGCAGGCTAAGAAGCTCTGTGTCAACTACTGCCGGATTCATTTAGCCAATCCCGAGCTCTTTCCGAGCCGGAACTCGGCTGGTACCGACGCCAAATCGCCGCTACTGCCGTTGATTTTTGCGGAGGTAGGTGGTGGAAGCGTGTTCGGGGGCGGTGGCGGGGCCAAGAGTCCGCCGGGGTTTCTGGAGGAGCTTTTCAGGGACCCGGACTTTGACAGCTTGGACCTGATTCTGAAGGGGTTATATGAGGAGTTGAGAGGGAGCGTGATGAATGTGTCTGCTCTGGGGAATTTTCAGGATTCTCTGAGGGCTTTGTTGTATTTGGTTAGGTTTCCCTTTGGTGCCAAGTCGCTTGTGAATCACGAGTGGTGGATTCCCAAAGGGGTTTATGTGAATGGCCGTGCTATTGAAATGACCAGCATTTTGGGTCCCTTTTTCCATATTAGTGCTCTTCCTGATCAGGCCTTTTTCAAGGGCCAGCCTGATGTTGGGCAGCAGTGTTTTTCTGATGCATCAACTAGGCGACCAGCTGATTTGTTATCTTCATTTTCCACTATCAAAACTGTCATGAACAACTTATATGATGGGCTAGCTGAAGTTATGCTCATCCTTCTTAAAAGTACAGATACTCGTGAAAGAGTACTTGAGTATCTTGCGGAGGTCATCAATATAAATGCATCCAGGGCTCATATACAGGTTGACCCTATTACTTGTGCAAGTTCAGGCACCTTTGTAAATCTCAGTGCTGTCATGCTTCGTCTATGTGAGCCATTTCTAGATGCAAATTTAACAAAAAGGGATAAAATTGATGCAAAATATGTACATTACTCAAATCGCTTGAAGATAAGTGGGTTGACTGCTCTTCATGCATCATCAGAAGAAGTTGCTGAATGGCTTAATAGTAAAAACCCAGCTAAGACTGGGGCAACCAATCAATATAATGATGATCAGAAACGCTTACAACAATCCCAAGAGGCCAGTAGTTCTGGTAGTAATAATGCCGGTGAGCTCTCAAATGAAAATTCTGCACGAGCTGAAAAGACGAAATATTCATTTATTTGCGAATGCTTCTTTATGACCGCAAGAGTGCTCAACTTAGGCCTTTTAAAAGCATTTTCTGACTTCAAACATTTAGTTCAGGATATATCTAGGTGTGAAGATGCTCTATCCACACTTAAAGCAATGCAGGAGCGGGCACCTACTCCTCAGGCAGAATTGGATATAAATCGACTTGAGAAAGAAATGGAGTTGTATTCACAGGAAAAATTATGTTATGAAGCTCAGATTTTGAGGGATAACACACTTATTCAAAATGCACTGTCCTTCTACCGCTTGATGATTGTTTGGTTGGTTGGCTTGGTGGGTGGTTTCAAGATGCCTCTACCACCAACTTGCCCTATGGAATTTGCTACCATGCCTGAACATTTTGTGGAAGATGCCATGGAACTTCTAATATTTGCTTCCCGGATTCCAAAGGCCTTAGATGGAGTTGTGCTGGATGAATTTATGAATTTTATAATTATGTTCATGGCCAGCCCTGAATTTATTAAAAACCCTTACCTGAGAGCAAAGATGGTTGAAGTTCTGAACTGCTGGATGCCTCGTAGGAGTGGCTCATCTGCAACAGCCACTCTATTTGAAGGCCATCAACTCTCTCTTGAGTATCTTGTGAGGAATCTTCTTAAACTTTATGTTGACATTGAGTTCACTGGTTCTCACACACAGTTCTATGACAAGTTTAACATCCGCCACAATATTGCGGAACTCCTCGAATACCTGTGGCAAGTCCCTAGTCATCGAAATGCTTGGAGACAGATTGCTAAGGAGGAGGAAAAGGGTGTCTATCTGAATTTCTTGAACTTTCTGGTCAATGATAGTATTTATCTTCTTGATGAAAGTTTGAAAAAAATTCTTGAGCTAAAAGAATTGGAGGCTGAGATGTCAAATACGGTTGAGTGGGAGCAAAGACCAGTTCAAGAGAGGCAGGAGAGGACCCGGTTATTCCATTCTCAAGAAAATATTATTCGAATAGATATGAAGTTGGCAAACGAAGATGTCAGCATGCTTGCATTTACTTCAGAACAGATTACTGCTCCGTTCCTACTTCCTGAGATGGTTGAAAGAGTAGCTAGCATGCTCAATTACTTCCTGCTGCAATTGGTTGGTCCGCAAAGAAAATCACTCAGTCTGAAGGATCCTGAGAAATATGAATTTCGTCCAAAGCATTTACTAAAACAGATTGTGCACATATACGTTCATCTGGCTAGAGGCGACACGAATTCCATCTTCCCATCTGTCATCTCAAGGGATGGTCGATCATACAATGATCAGTTGTTTAGTGCTGCAGCCGATGTCCTGCACAGAATAGGTGAGGACGGAAGAATAATACAGGAATTTATTCAACTTGGTGCTAAAGCTAAAGTTGCTGCTTCGGAGGCCATGGATGCTGAAGCTACTCTAGGAGAAATACCGGAGGAATTCCTTGATCCAATTCAATACACTTTGATGAAGGATCCAGTAATTTTGCCTTCTTCAAGGACCACGGTTGATCGTCCTGTCATTCAGAGGCATCTTCTTAGTGACAGTACTGACCCATTCAATCGATCTCATCTTACTGCGGATATGTTGATTCCCAATGTTGAGCTAAAAGCAAGAATTGAGGAGTTTGTGAGGTCTCAAGAAATGAAAAAACATGAAGGGCTAAGCCTACAGCGTAACAAGGACACAATTCAGACTACAAATGGGGAAATGTTGATTGATTAG 3123 0.44 MAATKPQRTPQEVEDIIIRKIFLVSITEIEKTSATDSRIVYLELTAAEILSEGKELRLSRDSMERVLIDRLSGDFSSTTGEASETPFQYLIGCYHRAHEEGKKIANMKDKSLRSEMEAVVRQAKKLCVNYCRIHLANPELFPSRNSAGTDAKSPLLPLIFAEVGGGSVFGGGGGAKSPPGFLEELFRDPDFDSLDLILKGLYEELRGSVMNVSALGNFQDSLRALLYLVRFPFGAKSLVNHEWWIPKGVYVNGRAIEMTSILGPFFHISALPDQAFFKGQPDVGQQCFSDASTRRPADLLSSFSTIKTVMNNLYDGLAEVMLILLKSTDTRERVLEYLAEVININASRAHIQVDPITCASSGTFVNLSAVMLRLCEPFLDANLTKRDKIDAKYVHYSNRLKISGLTALHASSEEVAEWLNSKNPAKTGATNQYNDDQKRLQQSQEASSSGSNNAGELSNENSARAEKTKYSFICECFFMTARVLNLGLLKAFSDFKHLVQDISRCEDALSTLKAMQERAPTPQAELDINRLEKEMELYSQEKLCYEAQILRDNTLIQNALSFYRLMIVWLVGLVGGFKMPLPPTCPMEFATMPEHFVEDAMELLIFASRIPKALDGVVLDEFMNFIIMFMASPEFIKNPYLRAKMVEVLNCWMPRRSGSSATATLFEGHQLSLEYLVRNLLKLYVDIEFTGSHTQFYDKFNIRHNIAELLEYLWQVPSHRNAWRQIAKEEEKGVYLNFLNFLVNDSIYLLDESLKKILELKELEAEMSNTVEWEQRPVQERQERTRLFHSQENIIRIDMKLANEDVSMLAFTSEQITAPFLLPEMVERVASMLNYFLLQLVGPQRKSLSLKDPEKYEFRPKHLLKQIVHIYVHLARGDTNSIFPSVISRDGRSYNDQLFSAAADVLHRIGEDGRIIQEFIQLGAKAKVAASEAMDAEATLGEIPEEFLDPIQYTLMKDPVILPSSRTTVDRPVIQRHLLSDSTDPFNRSHLTADMLIPNVELKARIEEFVRSQEMKKHEGLSLQRNKDTIQTTNGEMLID 1040
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun4g00736 1040 MobiDBLite consensus disorder prediction 426 460 - -
Viun4g00736 1040 FunFam Ubiquitin conjugation factor e4 a 942 1020 - -
Viun4g00736 1040 Pfam Ubiquitin elongating factor core 262 926 IPR019474 GO:0000151|GO:0006511|GO:0016567|GO:0034450
Viun4g00736 1040 PANTHER UBIQUITINATION FACTOR E4 4 1018 IPR045132 GO:0000151|GO:0030433|GO:0034450
Viun4g00736 1040 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 942 1021 IPR013083 -
Viun4g00736 1040 SMART Ubox_2 946 1009 IPR003613 GO:0004842|GO:0016567
Viun4g00736 1040 Pfam U-box domain 943 1014 IPR003613 GO:0004842|GO:0016567
Viun4g00736 1040 CDD RING-Ubox_UBE4A 945 1013 - -
Viun4g00736 1040 SUPERFAMILY RING/U-box 935 1015 - -
Viun4g00736 1040 ProSiteProfiles U-box domain profile. 942 1016 IPR003613 GO:0004842|GO:0016567
Viun4g00736 1040 Coils Coil 521 548 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun4g00736 1 1040 U-box Gene Family AT5G15400 75.475 0.0 1623
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun4g00736 K10597 - gmx:100806175 1870.51