Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun4g00733 ATGATGGAGGATAGGATGAAGAAGAGGGTGTTTTCTCCACCCATTGTGCTTCTCTTTCTAGCTTTCTCACTTCTTCTATTGCTTCCAGAAGCTTCTGCTACAAAGTTTACCGTTGGAGATAACAAGTTTTGGAACCCCAATATTAACTACACTGAATGGGCTAAAGGAAAACATTTTTACCTAGGAGATTGGCTCTATTTTGTCTACGACAGGAACCAAGCTAACGTGCTGGAAGTGAACAAGACCGATTATGAGACTTGTAACTCTGATCATCCACTCCAAAACTGGACAAGGGGTGCAGGAAGAGATGTGGTTCCTCTAAACGTAACCAAAACCTACTACATCATCAGTGGCAAAGGCTTCTGCTTCAGTGGCATGAAGATAGCTGTTCATGTTGAAAAGCTACCACCTCCGCCAAAAGCCGCCCCTATAAAATCCGGCGCGCCGACACTCTTCTCCACCGGCCACATTCTCCTCACGCCGGCCATTTTTGCCGTCGGAGCAGCTTGGGATGCATTCATTCATTTCTGGTAG 534 0.4607 MMEDRMKKRVFSPPIVLLFLAFSLLLLLPEASATKFTVGDNKFWNPNINYTEWAKGKHFYLGDWLYFVYDRNQANVLEVNKTDYETCNSDHPLQNWTRGAGRDVVPLNVTKTYYIISGKGFCFSGMKIAVHVEKLPPPPKAAPIKSGAPTLFSTGHILLTPAIFAVGAAWDAFIHFW 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun4g00733 177 Gene3D - 32 135 IPR008972 -
Viun4g00733 177 ProSiteProfiles Phytocyanin domain profile. 34 134 IPR003245 GO:0009055
Viun4g00733 177 FunFam Lamin-like protein 32 135 - -
Viun4g00733 177 SUPERFAMILY Cupredoxins 33 132 IPR008972 -
Viun4g00733 177 PANTHER BLUE COPPER PROTEIN 33 138 IPR039391 GO:0009055
Viun4g00733 177 Pfam Plastocyanin-like domain 44 126 IPR003245 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun4g00733 Viun-Chr4 5527435 5529910 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun4g00733 11 177 Phytocyanin Superfamily AT5G15350 58.580 7.44e-73 215
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun4g00733 - - gmx:100305564 295.434