Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun4g00730 ATGACGATACGGAAGGATGTGACAGTGGCGGCAGCGACGGTGGCGAGTGTGGTGGTGATGGGGTGGTTGTCGTTGGTGGTGATGGGAAATCCGATGCTTCATAAGGTGGGAGGCTCCAAAGGTTGGATCAATCATGATGTCAACTACACTCAATGGTCTGCTCAACAACATGTCTATGTTGGAGATTGGCTTTTGTTCAAGTTTGACAAAAGATACTTCAATGTTCTGGAGGTGAACGAGACAAGCTACGAGAATTGCATAGACAGAGACTTCATAAGCAACGTGACAAGAGGTGGTCGTGATGTGGTGCAGATGACAGAGGCAAGGACCTATTACTACCTCTCAGGTGGAGGCTACTGTTTCCATGGCATGAAAGTTGCTGTCAATGTTCAACAACTTCCTGCAATGGCACCAGCACCATCATCCATGGCGGTGTCTTCTTCTCTTTTGCCCTCACTCATGTGTTCCTGCATTTGGACCATTCTGGTTAATGTGCTTTGTTTTCTCAACTTGGTTTTCATCGATGGATTTTAG 534 0.4682 MTIRKDVTVAAATVASVVVMGWLSLVVMGNPMLHKVGGSKGWINHDVNYTQWSAQQHVYVGDWLLFKFDKRYFNVLEVNETSYENCIDRDFISNVTRGGRDVVQMTEARTYYYLSGGGYCFHGMKVAVNVQQLPAMAPAPSSMAVSSSLLPSLMCSCIWTILVNVLCFLNLVFIDGF 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun4g00730 177 SUPERFAMILY Cupredoxins 33 131 IPR008972 -
Viun4g00730 177 PANTHER BLUE COPPER PROTEIN 33 138 IPR039391 GO:0009055
Viun4g00730 177 Gene3D - 32 134 IPR008972 -
Viun4g00730 177 Pfam Plastocyanin-like domain 44 124 IPR003245 GO:0009055
Viun4g00730 177 ProSiteProfiles Phytocyanin domain profile. 32 132 IPR003245 GO:0009055
Viun4g00730 177 FunFam Lamin-like protein 30 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun4g00730 Viun-Chr4 5505838 5509319 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun4g00730 23 158 Phytocyanin Superfamily AT2G27035 43.066 4.30e-39 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun4g00730 - - gmx:100788336 247.669