Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Viun4g00690 | ATGGCTGCAATATCGTGTTCCTATGATGTGTTCCTCAGCTTCAGAGGCTCAGACACACGCCATGGTTTTGTTGGGAATCTTTACAAAGCCCTTGATGACAAGGGAATCCACACTTTCATTGATGATGAGAAGCTTCAGAGAGGAGAGGAAATAACACCTGCACTTATGAAGGCAATTGAAGAGTCTAGGATTGCCATCACTGTGCTCTCTCACAACTATGCTTCTTCATCATTTTGTTTAGATGAACTTGTTAATATCATTGCTTGTGCTAAGAAGAAAGGCTTGTTGGTTTTGCCTGTTTTTTATGACTTAAATCCTTCTGATGTAAGACACCAGAAAGGTAGTTTTGCAGAAGCTTTGGCAAGGCATGAGGAAAGGTTCAAAGACAAGAAGGAAAGTTTCAGCCATAACATGGATAGGTTGGAGAAATGGAAGATGGCTTTGCATCATGTGGCTAGCTTCTCTGGCTATCATTTCAAACAAGGATATGAATATGAATATGAGTTTATCAGAAGGATTGTTGAGTTTGTCTCTAGCAAGATAAATCGAACTCCTTTACATGTTGCGGATTACCCGGTTGGATTAGAGGCACAAATGGTAGAAGTTATGAAGCTTTTGGATGTTGGAAGTGAAGATGGTGTTCACATGGTTGGGATTCATGGAATTGGTGGGATAGGAAAAACAACACTTGCTCTTGCAATTTATAATATGGTTGTTGACCATTTTGATGGTCTGTGTTTTCTTGAAAACGTGAGAGAAAACTCAGACAGACATGGATTACAACATCTCCAAAGCATTCTTCTTGCAGAGTTGGTTAAAGAGAAGAGAATAAACATAGCAAGTGTGCAAGAAGGAATTTCAATGATACAACATAGGCTGCAACGAAAGAAGGTTCTTTTGATAGTCGATGATGTTGACAAGCATGAGCAGTTGCAGGCTATTGTTGGAAGATGTGAGTGGTTTGGTTCAGGTAGCAGAATCATGATAACGACTCGAGATGAACAAATTCTAGCATCTCATGAGGTTAAAAGAATGTATGAGGTGAAGGAATTGAACAAGAAGGATTCTCTTCAGTTGCTTACATGGAAAGCTTTTGGAACTGATGAAGCTGATCCAAGTTATAAGGAGGTCTTGAATCGTGTGGTAGCTTATGCTTCTGGCCTTCCATTGGCTTTGGAAGTAATAGGTTCCAACTTGTTTGGAAAAAGTATAGAAGAATGGAAATCTGCTATCAAACAATATGAAAGAATTCCTAATAACCAGATCCTGAAGATACTTAAAGTAAGCTTTGATGCTTTGGAGGAAGAAGAGAAGAGTGTTTTTCTTGACATTGCTTGTTGCTTCAAAGGATATGAATTGGAAGAGGTTCAAGATATACTTCGTGCACATTATGGTGATTGCATGAAATATCATATTGGGGTGCTGGTTGATAAATCTCTCTTAAAGTTTAGTGTGCATGGTGTGATGGTGAAAATGCATGACTTAGTAGAGGACATGGGTAAAGAAATTGTACGAAAAGAGTCACCAAAAGATCCAGGCAAACGAAGCAGATTATGGTTGCATGAGGATATAATACAAGTTTTAGAAGACAACACAGGAACTAGCGAAATTGAAATCATACATTTGGATTTTCCCCCACTTGACAAAGAAGAAATTGTAGAATGGAACAGAAAGGCCTTCAAGAAGATGAGAAACCTCAAAACACTAATTATTAAAAGTGGTAACTTTTCTGCAGGCCCCAAATATCTTCCAAATAGTCTAAGAGTATTAGAATGGTGGAGATATCCATCACATGATTTACCATCAGATTTTCATTCAAAGAAACTTGCCATGTGCAAGTTACCTCAGAGTTGCTTTACATCACATGAGTTGGTTAGGTTATTGAAGAAGTTCATGGGAATGAGATTTTTGAATTTGGACAAAAGCAAATCTTTAACACAGATACCTGATGTATCTGGTCTCCCAAATTTAGAGAAACTTTCATTTCAACATTGTCAGAATTTAACTGCAATTCACAATTCCATTGGCTTTCTGTGTAAACTCAAAATATTGAGTGCTTTTGGTTGCACCAAACTTGTGAGGTTTCCACCTATCAAGTTGTCTGCTCTTGAAAAGCTCAATCTCTCACGTTGTCACAGTCTTGAAAATTTTCCAGAAATATTAGGAAAGATGGAAAACATAAGGGTACTTCAGTTGGAGTACACTGCCATAAAAGAATTGCCATGTTCTTTTCAAAATTTTACACGACTTCAAGAGTTACAACTATCTAACTGTGGAGTTGTTCAACTACCAAGTAGCATTGCTGTGATGCCAGAACTTACTGATCTTATTGGTTGGAAATGGAAAGGGTGGCAATGGCTGAAAGAGGAAGAGGATGAAGAAAAACATGGATCATGTGTAGTTTCTTCAAATGTAGAATGTCTTTGGGCCTCAGAATGCAACCTGTGTGATGATTTCTTTTCAATCGGTTTCATGAGATTTGCTCATGTGAAAGACTTAGACTTGTCAAAGAACAATTTCACAGTCCTACCTGAATGCATCAAAGAGTTTCAATTTTTAAGGAAGCTCAAAGTGAGTGATTGCAAGCTTCTTCAGGAAATTAGAGGGATTCCACCAAGCTTGAAACATTTCTTAGCAAAAAATTGTAAATCCTTGACTTCCTCAAGTACAAGCATGTTCCTAAATCAGGAACTACATGAGGATGGAAAAACTGAGTTTTATTTACCAGGAGAAAGGGTTCCAGAATGGTTTGATCACAAAAGTAATGGACCTTCAATTTCTTTGTGGTTTCGTAATAGGTTTCCTGACAAGGTTGTTTGTCTTGTTATTGGAGCTGTGAATGACTCTGGAATGTTTAGGCCTATGGTAGTGATCAATGGCAATAAGAGTTTTGTTGGTAGTGGCTATTTCATGATGGGAATGGATCATACATATATTTTTGATCTTAAAACTATGGAGTTTGAAGATGACTTATATGGAGTTCCTTTAGAAAATGAATGGAACCATGCTGAAGTTAAATACATAGGTTTGGAAGAGACATCGATCCTTAAAGAAAGTGGAATTCATGTTTTCAAACAAGAAAGTGGCATGGAGGATATTTGGTTTTCTGATCCTTATGGCAAGAGAAAATTAGAAGATGATCTCAATAGTTTGGAATCACAGAACCAACAACTGCTAAAAAAGCATAGGTTTGTGGACATGGAAGCTTTGTAG | 3213 | 0.3757 | MAAISCSYDVFLSFRGSDTRHGFVGNLYKALDDKGIHTFIDDEKLQRGEEITPALMKAIEESRIAITVLSHNYASSSFCLDELVNIIACAKKKGLLVLPVFYDLNPSDVRHQKGSFAEALARHEERFKDKKESFSHNMDRLEKWKMALHHVASFSGYHFKQGYEYEYEFIRRIVEFVSSKINRTPLHVADYPVGLEAQMVEVMKLLDVGSEDGVHMVGIHGIGGIGKTTLALAIYNMVVDHFDGLCFLENVRENSDRHGLQHLQSILLAELVKEKRINIASVQEGISMIQHRLQRKKVLLIVDDVDKHEQLQAIVGRCEWFGSGSRIMITTRDEQILASHEVKRMYEVKELNKKDSLQLLTWKAFGTDEADPSYKEVLNRVVAYASGLPLALEVIGSNLFGKSIEEWKSAIKQYERIPNNQILKILKVSFDALEEEEKSVFLDIACCFKGYELEEVQDILRAHYGDCMKYHIGVLVDKSLLKFSVHGVMVKMHDLVEDMGKEIVRKESPKDPGKRSRLWLHEDIIQVLEDNTGTSEIEIIHLDFPPLDKEEIVEWNRKAFKKMRNLKTLIIKSGNFSAGPKYLPNSLRVLEWWRYPSHDLPSDFHSKKLAMCKLPQSCFTSHELVRLLKKFMGMRFLNLDKSKSLTQIPDVSGLPNLEKLSFQHCQNLTAIHNSIGFLCKLKILSAFGCTKLVRFPPIKLSALEKLNLSRCHSLENFPEILGKMENIRVLQLEYTAIKELPCSFQNFTRLQELQLSNCGVVQLPSSIAVMPELTDLIGWKWKGWQWLKEEEDEEKHGSCVVSSNVECLWASECNLCDDFFSIGFMRFAHVKDLDLSKNNFTVLPECIKEFQFLRKLKVSDCKLLQEIRGIPPSLKHFLAKNCKSLTSSSTSMFLNQELHEDGKTEFYLPGERVPEWFDHKSNGPSISLWFRNRFPDKVVCLVIGAVNDSGMFRPMVVINGNKSFVGSGYFMMGMDHTYIFDLKTMEFEDDLYGVPLENEWNHAEVKYIGLEETSILKESGIHVFKQESGMEDIWFSDPYGKRKLEDDLNSLESQNQQLLKKHRFVDMEAL | 1070 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Viun4g00690 | 1070 | Gene3D | - | 180 | 345 | IPR027417 | - | |
| Viun4g00690 | 1070 | Gene3D | Ribonuclease Inhibitor | 713 | 900 | IPR032675 | - | |
| Viun4g00690 | 1070 | Coils | Coil | 1041 | 1068 | - | - | |
| Viun4g00690 | 1070 | SUPERFAMILY | L domain-like | 545 | 891 | - | - | |
| Viun4g00690 | 1070 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 179 | 444 | IPR027417 | - | |
| Viun4g00690 | 1070 | PANTHER | LEUCINE-RICH REPEAT-CONTAINING PROTEIN | 8 | 762 | IPR044974 | GO:0006952 | |
| Viun4g00690 | 1070 | Gene3D | Ribonuclease Inhibitor | 533 | 712 | IPR032675 | - | |
| Viun4g00690 | 1070 | Gene3D | - | 6 | 179 | IPR035897 | - | |
| Viun4g00690 | 1070 | PRINTS | Disease resistance protein signature | 698 | 714 | - | - | |
| Viun4g00690 | 1070 | PRINTS | Disease resistance protein signature | 385 | 399 | - | - | |
| Viun4g00690 | 1070 | PRINTS | Disease resistance protein signature | 292 | 306 | - | - | |
| Viun4g00690 | 1070 | PRINTS | Disease resistance protein signature | 216 | 231 | - | - | |
| Viun4g00690 | 1070 | Gene3D | - | 350 | 434 | IPR042197 | - | |
| Viun4g00690 | 1070 | Pfam | NB-ARC domain | 197 | 420 | IPR002182 | GO:0043531 | |
| Viun4g00690 | 1070 | SUPERFAMILY | "Winged helix" DNA-binding domain | 421 | 529 | IPR036390 | - | |
| Viun4g00690 | 1070 | FunFam | Disease resistance protein (TIR-NBS-LRR class) | 4 | 183 | - | - | |
| Viun4g00690 | 1070 | SMART | till_3 | 7 | 154 | IPR000157 | GO:0007165 | |
| Viun4g00690 | 1070 | Pfam | TIR domain | 8 | 184 | IPR000157 | GO:0007165 | |
| Viun4g00690 | 1070 | ProSiteProfiles | TIR domain profile. | 6 | 181 | IPR000157 | GO:0007165 | |
| Viun4g00690 | 1070 | SUPERFAMILY | Toll/Interleukin receptor TIR domain | 6 | 157 | IPR035897 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Viun4g00690 | Viun-Chr4 | 4910312 | 4914452 | Dispersed/Tandem |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Viun4g00690 | 8 | 776 | WRKY Transcription Factor Family | AT4G12020 | 31.461 | 2.96e-83 | 295 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Viun4g00690 | - | - | gmx:100780257 | 1777.3 |