Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Viun4g00666 | ATGGGAAGCATTGATTGTATTAGGGTTGATTCTTCAATTGGGGGCAAAACCAAGAGAGGAAGAAACAACAAAGATGTTGTTCATGGTAGTACTGAAGAAGGTTCAAGATTTTGGAAGAAATTGAGGATTTTCCTGGGTTGCATGCTTTGGAGTTCTAAAGGGGAAGCTTCTTCAAACAAAATCAATCAAATTCATGGAAAACATGTTACAAATGATGTTGAGAGACAAGAACCAATTGTCCCAAGATCCTCATCAAACAGAAGGTTACTTAGGCATGCAACAAGACTGTGTGTTCCGAATCAAGAACTGTTTGAAGCTTCTTTGCTTCTTCGAAGGTTCAGTTTTCAAGATCTTATGTTGGCAACACGAACTTTTAAGGTTGAGAATTTTCATGACGAGGAAGGGTTTGGGATTTTGTTGAAGGGTTGGATTAATCAATATGGGAACTATGCAGCAAGGCCTGGAAAAGGGATTCCCATTGCAGTCAAGGCACTCAACTTAAATGAATCTCAAGATCAAAAAGAATGGCTTGATGAAATTAGTTATCTCAGTGAACTCAATCATCTAAATCTGGTTAAAATAGTAGGGTTTTGCATTGAGGATGGCAAAAGACTACTAGTACATGAGTATATGTGTCAAGGAAGCTTAGAGAAGCATCTATTCAGCAGAACTCTTCGACTTACATGGCCTATGAGGATGAAAATTGCAATTGGTGCTGCCAATGGCCTTGCATTTTTACAAGAGGAAGCTTCAAGGCCAATAATATTTCCAGATTTTAAGACATCTAAGATCCTATTGGATATGGACTACAACGCAAAACTTTGGGACTTTGGTCTAGCTAGAGAAATTCATGCACCAACTAAAGTAGTAGTAACAAAAGGTTATGAAGCCCCTGAGTATGTCATGAAAGGACACATCACTTCTGAAAGCAATGTTTATAGCTTTGGGATTGTTCTGCTTGAAATACTGACAGGAAGAAGAGCCATGGATGAAACAATGCCTGTAGAGGAACAAAACCTGATAGAATGGTTGCGACCTCATTTGAGAAACAAAGCAAATTTTCATTATTTGATGGATCCTAGACTTGAAGGACAATACCCTACAAAGTGTGCTCATAGGACAATGAGAATAGCTACTCATTGTCTTCGCCTAGACCCTAAAGCAAGACCCCTTATGAGTGAAATAGTTCACAAGTTGAAGTATCTACATGATGAGATGGTTGGTGAGGTTGGTCCCAAAAAAAACTCACATGGTGTACGCCCTTCCAACCATGCTAGTGCTAACAGGTGTGCCCCTGGAAGAGGTTCATCACCAAAAGTTTTAAGGTGCTTTCAAGGTTCACCACAGTGCCAATACTACCCTCTTCCTCTACCTCCAACTCCAGCAAATCCTTGGATTGCATCTTCATCTAAATCTTAG | 1419 | 0.3968 | MGSIDCIRVDSSIGGKTKRGRNNKDVVHGSTEEGSRFWKKLRIFLGCMLWSSKGEASSNKINQIHGKHVTNDVERQEPIVPRSSSNRRLLRHATRLCVPNQELFEASLLLRRFSFQDLMLATRTFKVENFHDEEGFGILLKGWINQYGNYAARPGKGIPIAVKALNLNESQDQKEWLDEISYLSELNHLNLVKIVGFCIEDGKRLLVHEYMCQGSLEKHLFSRTLRLTWPMRMKIAIGAANGLAFLQEEASRPIIFPDFKTSKILLDMDYNAKLWDFGLAREIHAPTKVVVTKGYEAPEYVMKGHITSESNVYSFGIVLLEILTGRRAMDETMPVEEQNLIEWLRPHLRNKANFHYLMDPRLEGQYPTKCAHRTMRIATHCLRLDPKARPLMSEIVHKLKYLHDEMVGEVGPKKNSHGVRPSNHASANRCAPGRGSSPKVLRCFQGSPQCQYYPLPLPPTPANPWIASSSKS | 472 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Viun4g00666 | 472 | MobiDBLite | consensus disorder prediction | 412 | 435 | - | - | |
Viun4g00666 | 472 | PANTHER | OS01G0588500 PROTEIN-RELATED | 85 | 402 | - | - | |
Viun4g00666 | 472 | Pfam | Protein tyrosine and serine/threonine kinase | 136 | 399 | IPR001245 | GO:0004672|GO:0006468 | |
Viun4g00666 | 472 | Gene3D | Phosphorylase Kinase; domain 1 | 100 | 210 | - | - | |
Viun4g00666 | 472 | Gene3D | Transferase(Phosphotransferase) domain 1 | 211 | 417 | - | - | |
Viun4g00666 | 472 | ProSiteProfiles | Protein kinase domain profile. | 125 | 402 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Viun4g00666 | 472 | SUPERFAMILY | Protein kinase-like (PK-like) | 104 | 403 | IPR011009 | - | |
Viun4g00666 | 472 | FunFam | protein STRUBBELIG-RECEPTOR FAMILY 8 | 211 | 409 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Viun4g00666 | Viun-Chr4 | 4514185 | 4526793 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Viun4g00666 | 107 | 426 | Glycoside Hydrolase | AT3G07070 | 40.426 | 2.14e-79 | 251 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_RLCK-VIIa-2 | Viun4g00666 | PK_Tyr_Ser-Thr | 1.5e-38 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Viun4g00666 | - | - | var:108344548 | 719.924 |