Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun4g00665 ATGAGTGCTGGTAAATCCAACGGAGGAAACAAAAACAAAGATGTTGCTCAAGGTGCCATTAAAGAAGGCTCAAGTTTTTGGAAGAAATTGAAGATTTTTCTAGGTTGCATGCTTCTGAGTTCAAAAGAGAAAGGAACTTCTGGTGACAAAAGCAAAGATGGTGAAGGAAGAAATGTGAGAAAAGATATTGTTCGGCGCAAAAGGTCAAAGAAACCCTCATCCAGCAACGAAGGCCAGGAGTTTATTGCAACTTCTTCCAATCTCAGGAGGTTCACTTTTCTCGATATTCAGATTGCAACAATGAATTTTGATACTAGGAGTTTTCTTGGTAGGGGAGGTTTTGGAACTGTGTTCAAAGGTTGGGTTGATGAAAGAGGGAATTGTGCAGCAACACCAGAATCAGAATCAAGGATTCCGGTAGCAGTGAAGACTCTAAACCCAAATGGATTTCAAGGTCATAAACAATGGCTTGCTGAAATTAAATATCTGGGTGAACTCTATCATCCGAATCTAGTGAGATTGGTGGGATATTGCATGGAGGAAGATAAAAGGGTACTCATGTACGAATACATGAGTCGAGGAAGCTTAGAGAAGTATCTGTTCCAAAGAGGACATGTGCGACTTCCATGGCGTATCAGGATTAAAATTGCAGTGGATGCTGCTAATGGTTTGACATTTTTGCATGAGGAAGCTTCACGGGCAGTGATCTTTCGAGATTTCAAGACATCCAATATCCTATTGGATAAGGACTTCAATGCAAAACTTTCAGACTTTGGGTTTGCAAAAGATGCTCCAGTGGGAGGTAAAAATCATGTCTCTACAGAGGTTATGGGAACAGAAGGTTACATAGCCCCTGAGTATGTGTTGACAGGGCACCTTACAGCGAAGAGTGACGTTTATAGCTTTGGGATGGTTCTCCTTGAAATGCTGACAGGAAGAAGAGCTGTGGATCAAATGAGGCCTACAAAAGAGAAAAACTTGGTGGATTGGTTGCGTCCTCGAATAAGGAGGAAAGAAAATTTTCACTATGTGATGGACCCTAGATTTGAAGGGCAATATCCAATTAGGCATGCATATAGGGCAATGAGGTTAGCCGTTGAGTGTGTTCGCCATGATCCAAGTGCAAGACCATTGATGAGTGAAGTGGTTGGTGAGTTGAAGTCTTTATTGGCTCGTGATGATGGCACACATTCTGGTCCTTCAACTTCACCTTCGATCCCTTCAACCTCACTTGGGAGAATCCATGTTGGTCCCTCCAACCATGGTGGTGGCAGTGGTAGTGGTGTTAACAAGTACGGCCTCAGAACTGCTTCGGAACCAAATGTTCCACGGCGTTTTCAGGCCTCACCAATGGGCCAAGAAAGTCCTCTGACTCCATCTCCTCATAATCCTAGTGTTGAACCTTAA 1407 0.4314 MSAGKSNGGNKNKDVAQGAIKEGSSFWKKLKIFLGCMLLSSKEKGTSGDKSKDGEGRNVRKDIVRRKRSKKPSSSNEGQEFIATSSNLRRFTFLDIQIATMNFDTRSFLGRGGFGTVFKGWVDERGNCAATPESESRIPVAVKTLNPNGFQGHKQWLAEIKYLGELYHPNLVRLVGYCMEEDKRVLMYEYMSRGSLEKYLFQRGHVRLPWRIRIKIAVDAANGLTFLHEEASRAVIFRDFKTSNILLDKDFNAKLSDFGFAKDAPVGGKNHVSTEVMGTEGYIAPEYVLTGHLTAKSDVYSFGMVLLEMLTGRRAVDQMRPTKEKNLVDWLRPRIRRKENFHYVMDPRFEGQYPIRHAYRAMRLAVECVRHDPSARPLMSEVVGELKSLLARDDGTHSGPSTSPSIPSTSLGRIHVGPSNHGGGSGSGVNKYGLRTASEPNVPRRFQASPMGQESPLTPSPHNPSVEP 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun4g00665 468 SUPERFAMILY Protein kinase-like (PK-like) 86 396 IPR011009 -
Viun4g00665 468 Pfam Protein tyrosine and serine/threonine kinase 107 385 IPR001245 GO:0004672|GO:0006468
Viun4g00665 468 Gene3D Phosphorylase Kinase; domain 1 73 190 - -
Viun4g00665 468 CDD STKc_IRAK 109 389 - -
Viun4g00665 468 FunFam Serine/threonine-protein kinase BIK1 69 190 - -
Viun4g00665 468 MobiDBLite consensus disorder prediction 42 80 - -
Viun4g00665 468 PANTHER OS01G0588500 PROTEIN-RELATED 68 388 - -
Viun4g00665 468 ProSiteProfiles Protein kinase domain profile. 103 390 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun4g00665 468 MobiDBLite consensus disorder prediction 395 415 - -
Viun4g00665 468 MobiDBLite consensus disorder prediction 392 468 - -
Viun4g00665 468 Gene3D Transferase(Phosphotransferase) domain 1 191 399 - -
Viun4g00665 468 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 191 399 - -
Viun4g00665 468 MobiDBLite consensus disorder prediction 45 62 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun4g00665 Viun-Chr4 4492637 4496229 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun4g00665 67 408 Glycoside Hydrolase AT3G07070 45.217 2.30e-98 300
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Viun4g00665 PK_Tyr_Ser-Thr 6e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun4g00665 - - vum:124826044 763.451