Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun4g00663 ATGCAGGAAGAAATTATTTATCTTAGTAAACTCCAACATTTAAATCTGGTTAGACTCTTAGGATTTTGTCTTGAGGATGACAAAAGGCTGCTTGTGTACGAGCATGTATGTGAAGGAAGTTTAGAGAAGCATCTTTTCAAGAGTATAGCTGTACACCTTACATGGCCTATGAGGATGAAAATTGCAATTGGCGCTGCTAATGGCATGTCATTTTTGCATGAGGAAACTTCAAGACCATTAATATTTCGAGATTTTAAGACCTCTAATATCCTATTGGATAAGGATTACAACACAAAACTTTGGGACTTTAGTCTTGCGAAAGATGCTTCAATGGGACATGAAATCCATACAACAACTAAAAGGGTCAGATCAAAAGGCTACGAAGCCCCAGAGTATATAATGACAGGACTCCTTACTTCCAAGAGTAATGTTTATAGCTTTGGACTAGTTCTACTTGAACTATTGACAGGAAGAAGAGTTATAGATCAAACAATGCCTACAGAGGAGCAAAACTTGATAGAATGGTTAGGGCCTCGTCTTAGGAACAAAGCAAACTTCCATTATTTGATGGATCCTAGACTTGAAGGTAAATATCCAACAAAATTTGCTCATAGGACAATGAGGTTAGCTATTCATTGTCTTCGCCTTGACCCAAACACAAGACCCCATATGAGACAAGTACTTCATGAGTTAAAGTCTTTGCATGATGACATGCTTGGATCCTCAACCTCCCATAGGAGAATGTATAAAGGTCCATCAAACCATGTTAGTCCAAACAAGTATGGCGTTGGAATATGTTCATCATCGAATTTTCCAAGGTGCTTCCAAGCCATGCCAGAGTGTCAAGATTATCCTCTACCTCTACCTCCATCTCCATCAAATCCAAGAGTTAGATCTTCGTCAAATCCTAGTTTGAAAATTTATTCAACCTAG 933 0.3837 MQEEIIYLSKLQHLNLVRLLGFCLEDDKRLLVYEHVCEGSLEKHLFKSIAVHLTWPMRMKIAIGAANGMSFLHEETSRPLIFRDFKTSNILLDKDYNTKLWDFSLAKDASMGHEIHTTTKRVRSKGYEAPEYIMTGLLTSKSNVYSFGLVLLELLTGRRVIDQTMPTEEQNLIEWLGPRLRNKANFHYLMDPRLEGKYPTKFAHRTMRLAIHCLRLDPNTRPHMRQVLHELKSLHDDMLGSSTSHRRMYKGPSNHVSPNKYGVGICSSSNFPRCFQAMPECQDYPLPLPPSPSNPRVRSSSNPSLKIYST 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun4g00663 310 Pfam Protein tyrosine and serine/threonine kinase 2 231 IPR001245 GO:0004672|GO:0006468
Viun4g00663 310 MobiDBLite consensus disorder prediction 286 310 - -
Viun4g00663 310 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 36 244 - -
Viun4g00663 310 PANTHER OS01G0588500 PROTEIN-RELATED 2 235 - -
Viun4g00663 310 Gene3D Transferase(Phosphotransferase) domain 1 37 250 - -
Viun4g00663 310 ProSiteProfiles Protein kinase domain profile. 1 238 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun4g00663 310 Gene3D Phosphorylase Kinase; domain 1 1 35 - -
Viun4g00663 310 SUPERFAMILY Protein kinase-like (PK-like) 2 239 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun4g00663 Viun-Chr4 4480976 4486073 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun4g00663 4 257 Glycoside Hydrolase AT3G07070 45.136 4.80e-70 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Viun4g00663 PK_Tyr_Ser-Thr 2e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun4g00663 - - vun:114182052 615.535