Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun4g00617 CTAAGAATAAAAAAAGGTTCAAAGATAAGAAGGAGAAGTTCCAGAGATGCACAATTGCTCTCATCTCATCAAGTTAAAAGAGCTTATGAGGTCAAGACATTGAATGCAAAGGATGCTCCTAAGTTGCTTACATGGAAAGCGTTCAAAACGGAACAAGTTGATCCAAGTTATGTAAAGGTCTTGAATCGTGTAGTAGCATATACTTCTGGCCTTCCATTGGCTTTGGAAGTAATTGGTTCCAACCTATTTGCAAAAAGTGTGGAACAATGGAAATCTGCTGTTAATAAATATAAAAGAATTCCTAACAATCAAATCCTCGAGATACTTAAAGTAAGCTTTGATGCTTTGGAGGAAGAGGAGAAGGGTGTTTTTCTTGACATTGCTTGTTGCTTCAAAGGATATAAATTAACAGAGGTCGAGATTATGCTTCGTGCTCTTTATGATGACTGCATGAAACATCATATTGGGGTGTTAATTGAAAAATCTCTCATAAAGGTCAGTCAGAGAGGAACAGTTGAATTGCACGACTTGATTAAGGACATGGGTAGAGAAATTGACCAGAAAGAATCACCTAAAGAAGCAGGAAGGCGCAGGAGATTATGGTTACCAAAAGATATAATTCATGTTCTAAAACACAACACGGGAACTAGTGAAATTTGA 660 0.3697 LRIKKGSKIRRRSSRDAQLLSSHQVKRAYEVKTLNAKDAPKLLTWKAFKTEQVDPSYVKVLNRVVAYTSGLPLALEVIGSNLFAKSVEQWKSAVNKYKRIPNNQILEILKVSFDALEEEEKGVFLDIACCFKGYKLTEVEIMLRALYDDCMKHHIGVLIEKSLIKVSQRGTVELHDLIKDMGREIDQKESPKEAGRRRRLWLPKDIIHVLKHNTGTSEI 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun4g00617 219 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 14 127 IPR027417 -
Viun4g00617 219 Pfam NB-ARC domain 14 99 IPR002182 GO:0043531
Viun4g00617 219 Gene3D - 33 117 IPR042197 -
Viun4g00617 219 SUPERFAMILY "Winged helix" DNA-binding domain 104 211 IPR036390 -
Viun4g00617 219 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 6 210 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun4g00617 Viun-Chr4 4045247 4046573 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun4g00617 13 211 WRKY Transcription Factor Family AT5G45050 34.158 2.20e-27 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun4g00617 - - vun:114182048 429.098