Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun4g00615 ATGATAGGGATCCATGGAATGGGTGGTGTAGGAAAAACAACACTCGCTTTAGCAGTTTATAATTTGATTGCTGACTGTTTTGATGGTTCTTGTTTTATTCAAAACGTGAGAGAGATATCAAACAAACATGGGCTGGAACACCTCCAAAGCATCCTTCTTTCAAAATTACTTGGAGATAAGGACATCAACTTGGCTAGTGAACATGAAGGAATTTCAGTGATACAACAAAGGTTGCAGCGAAAAAAGGTTCTCTTGATTCTTGATAATGTTGACAAGTGCGAGCAGCTACAGACACTGGCTGGAAGCCCTGATTGGTTTGGTCCTGGCAGCAGGGTCATCATCACAACTCGAGATACACATCTGCTTGCATCTCATCAGGTCAAAACAACATATGAGGTCAAGACATTGTATGCAAAGGACGCTCTTCAGTTGCTTACATGGAAAGCTTTCAAAACGGAACATGTTGATCCTCGTTACGTGGAGGTCTTAAATGATGTGGTAATTTATGCTTCTGGCCTTCCATTGGCTTTGGAAGTAATTGGTTCCGACCTGTTTGCAAAAACTGTGGAAGAGTGGAAATCTGCTATCAGTCAATATAAAAGAATTCCTAACAATCAAATCCTAGAGATTCTTAAAGTAAGCTTCGATGCTTTGGAGGAAGAAGAGAAGTGTGTTTTTCTTGACATTGCTTGTTGCTTCAAAGGATATGAACTGACAGAGGTTGAGGTTATGCTTCGTGCTCTCTACCATGACTGCATGAAACATCATATACGTGTGCTGCTTGAAAAATCTCTCATAAAGATTGGTTGGTTTACTACAATTGAAATGCACGACTTAATTGAGGACATGGGAAGACAAATTGACCTGAAACAATCAGCGAAAGAGCCAGGAAAGCGCAGGAGATTATGGTTACCTAAAGATATAATTCAAGTTTTAAAGGACAACACAGAAACTAGCAGGATTGAGATACTATGTTTTCATATCTCCATATCTGAGAAAGAAGAAACACTAGATTGGAATAGAAATGCCTTTGGAAAAATGGAAAAGCTTAAAATACTTATCATTAGAAATGGTAAATTTTGCAAAGGTCCCAATTCTTTTCCAGAAAGTTTGAGAGTACTGGTATGGCATGGATACCCTTCAAATTGTTTACCATCTAACTTTGATCCGAGCAAACTTGTGACATGCAAGTTACCTAACAGTCATTTTACATCATTTGGATTCCTTGGCTCCTCAAAGAAGTTAGAGAATCTAACCGAATTGAATTTTGACTGCTGCGAACTCTTAACACGAATGCCTGACGTATCAGATCTCCCAAATTTGCAGTTGACGACTCAATTGGTTTTCTGA 1350 0.3889 MIGIHGMGGVGKTTLALAVYNLIADCFDGSCFIQNVREISNKHGLEHLQSILLSKLLGDKDINLASEHEGISVIQQRLQRKKVLLILDNVDKCEQLQTLAGSPDWFGPGSRVIITTRDTHLLASHQVKTTYEVKTLYAKDALQLLTWKAFKTEHVDPRYVEVLNDVVIYASGLPLALEVIGSDLFAKTVEEWKSAISQYKRIPNNQILEILKVSFDALEEEEKCVFLDIACCFKGYELTEVEVMLRALYHDCMKHHIRVLLEKSLIKIGWFTTIEMHDLIEDMGRQIDLKQSAKEPGKRRRLWLPKDIIQVLKDNTETSRIEILCFHISISEKEETLDWNRNAFGKMEKLKILIIRNGKFCKGPNSFPESLRVLVWHGYPSNCLPSNFDPSKLVTCKLPNSHFTSFGFLGSSKKLENLTELNFDCCELLTRMPDVSDLPNLQLTTQLVF 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun4g00615 449 Gene3D Ribonuclease Inhibitor 268 447 IPR032675 -
Viun4g00615 449 Pfam NB-ARC domain 2 201 IPR002182 GO:0043531
Viun4g00615 449 Gene3D - 1 131 IPR027417 -
Viun4g00615 449 SUPERFAMILY "Winged helix" DNA-binding domain 206 313 IPR036390 -
Viun4g00615 449 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 229 IPR027417 -
Viun4g00615 449 Gene3D - 135 219 IPR042197 -
Viun4g00615 449 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1 442 IPR044974 GO:0006952
Viun4g00615 449 SUPERFAMILY L domain-like 337 442 - -
Viun4g00615 449 PRINTS Disease resistance protein signature 170 184 - -
Viun4g00615 449 PRINTS Disease resistance protein signature 413 429 - -
Viun4g00615 449 PRINTS Disease resistance protein signature 1 16 - -
Viun4g00615 449 PRINTS Disease resistance protein signature 77 91 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun4g00615 Viun-Chr4 4015726 4034257 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun4g00615 2 443 WRKY Transcription Factor Family AT5G45050 32.328 2.68e-57 202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun4g00615 - - vun:114181792 908.672