Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun4g00577 ATGGGGAGTGTTGTGGATTGGGTCTGCCACAAGATTAATCCTGGTCATTTACATGTTGCGGATTATCCAGTTGGACTAGGGTGGCCAGTGGTTGAACTAAGGAAGCTTCTAAATGTTGAATCTGATGATGGATTCCACATGATAGGGATCCATGGAATGGGAGGGGTAGGGAAAACAACACTCGCTTTAGCAATTTATAATATGATTGCTATCTGTTTTGAGGGTTCTTGTTTTCTTCAAAACGTGAGAGAGAAATCAAACAAACATGGGCTGGAACATCTCCAAAGCATCCTTCTTTCAAAAATACTTGGAGAGAAGGACATCAACTTAGCAAGTGAGCATGAAGGAATTTCAATGATACGACAAAGGTTGCAACGAAAGAAGGTTCTCTTGATTCTAGATGACGTTGACAAGTGCGAGCAGTTACGGGCACTGGCTGGAAGCCCTGATTGGTTTGGTCCCAGCAGCAGGGTCATCATCACAACTCGAGATACTCATCTGCTTGCATCTCATCAGGTTAAAAGAACATATGAGTTCAATCCATTGAATGAAAAGGATGCTCTTCAGTTGCTTACATGGAAAGCTTTCAAAACGGAACAGGTTGATCCAAGTTACATAGAGGTCTTGAATCATGCAGTAACTTGTGCTTCTGGCCTTCCATTGGCTTTGGAAGTAATAGGTTCCAACCTGTTTGCAAAAAGTCTGGAACAATGCAAATCTGCTGTCAATCAATATAAAAGAATTCCTAGCAGTCAAATCCTTGATAAACTTAAAGTAAGCTTTGATGCTCTGGAGGGAGAAGAGAAGAGTGTTTTTCTTGACATTGCCTGTTGCTTCAGAGGATACGCATTGGCAGAGGTTGAGATTATGCTTCGTGCTCTTTATGACGATTGCATGAAACATCATATTGGTGTGCTAATTGATAAATCTCTCATAAAGATTGGTTGGTCGAGTACAATTGAAATGCACGACTTAATTGAGGACATGGGTAGACAAATTGACCGGAAAGAATCATCCAAAGAGCCGGGAAAGTGCAGGAGATTATGGTTACCTAAAGAGATAATTCAAGTTTTAAAGAACAACACAGGCACTAGTAGGATTGAGATTTTATGTCTTGATATCTCCGTATCTGAGAAAGAAGAAACACTACATTGCAATGAAGACGCCTTTGAAAAGATGAAAAACCTAAAAATACTTATTATTAGAAATGGCAAAGTTTCCGGAGCTCCCAGTTGTTTACCAGAAAGTTTGAGAGTACTGGAATGGCATGGATACCCTTCCAATTGTTTACCATCAAGTTTTGATCCGAACAAACTTGTGACATGCAAGTTACTTAAGAGTCATTTTACGTCATTTGGGTTCCTTGGAAAGAAGTTTGAGAATCTAACCGTCTTGAATTTTGACAACTGCCAACTTTTAACACGGATACCTGACGTATCTGATCTCTCAAATTTGAAGAAACTTTCATTTGAAGGGTGTAAGGGTTTAATTGCACTTGACGACTCAATTGGTTTTCTGAATAAACTTATAATATTGAAAGCTGAAGGTTGCACGAAGCTGAGGAGATTTCCACCTCTCAACTTACCCTCTCTTGAAAAACTTGAACTTTCATATTGTTCAAGTCTTAAGAATTTTCCAGAAATATTAGGAAAGATGGGAAATATTGGGGAACTTAGTTTGTCTAAACTTGCCATAAAAGAGTTGCCAGTTTCATTTCAAAATCTTACTGAACTCCATCGGTTACATATTTCATGTGATTTTTATCGGTTAAATAGCATTGTCTTAACGCCTAAATTGGTTGCTATTATCGTTATTAATTGCAAGGATTGGAAATGGGTAAAATCAAAAGATGGTGAAGAAGTGGGCTCAACGGTATTTTCAGATCTACGTTACTTTGAGCTCAACTCCTGCAACCTGAACGATGATTTTTTTTCAGCAGCTTTCATGCAGTTGGCCACAGTGACATCTTTACACTTCCGGGAAGTTAATATCACATTCCTTCCCGAGTGCATCAAAGAATTTCACTGCCTGAATTATCTCAATGTGACTAGATGCAAGCGTCTCGAGGAAATTAGAGGGGTTCCACCAAACTTGAAAATTTTTAGGGCGATACACTGTACATCCTTAACTTCTTCGGGTTCAAGCATGTTGTTGAATCAGCAACTCCACGAGGTTGGAGAGACTGATTTTATTTTTCGAGGAGGAAGTATCCCAAGTTGGTTCGATAAACAAAGCAGAGGACCTTCAATTTCTTTCTGGTTTCGTCATAAATTCCCTCCCAAAGTTCTTTGTCTTACTGTTGCACCTCTACTGGATCTTGTTGCAGAAATGATTAGACCCATGGTGTTAATCAACGACAAAGTTCAAGAACATACTTTTAAACCTATCGATGAGGTAAGGCTGGAATTGGATCATATGCACCTCTTTGGTGTAAGAGAGTTACATTTTGATGATGGTCTGATGGAAATGCCTTTAGAAAAAGAGTGGAAACATGTGGAGGTTACATACGAAGGTTTGGTTGATACCTCACTCATCAAAGCAATTGGAATCCATGTAGTGAAAGAGGAAAGCATGGGCATGAAGGACATTCGATTTGATGATCCTTACACCAGTACAAAAGTGTGGCCATGCAACTTCTTTATAGCTTTTCTTCCTTTCTTTTTTCTCTTTTCATTAGCTCTGGTTTTATTTACAAGTTTCATGGCCTACCCAACCCAACTATGA 2724 0.3913 MGSVVDWVCHKINPGHLHVADYPVGLGWPVVELRKLLNVESDDGFHMIGIHGMGGVGKTTLALAIYNMIAICFEGSCFLQNVREKSNKHGLEHLQSILLSKILGEKDINLASEHEGISMIRQRLQRKKVLLILDDVDKCEQLRALAGSPDWFGPSSRVIITTRDTHLLASHQVKRTYEFNPLNEKDALQLLTWKAFKTEQVDPSYIEVLNHAVTCASGLPLALEVIGSNLFAKSLEQCKSAVNQYKRIPSSQILDKLKVSFDALEGEEKSVFLDIACCFRGYALAEVEIMLRALYDDCMKHHIGVLIDKSLIKIGWSSTIEMHDLIEDMGRQIDRKESSKEPGKCRRLWLPKEIIQVLKNNTGTSRIEILCLDISVSEKEETLHCNEDAFEKMKNLKILIIRNGKVSGAPSCLPESLRVLEWHGYPSNCLPSSFDPNKLVTCKLLKSHFTSFGFLGKKFENLTVLNFDNCQLLTRIPDVSDLSNLKKLSFEGCKGLIALDDSIGFLNKLIILKAEGCTKLRRFPPLNLPSLEKLELSYCSSLKNFPEILGKMGNIGELSLSKLAIKELPVSFQNLTELHRLHISCDFYRLNSIVLTPKLVAIIVINCKDWKWVKSKDGEEVGSTVFSDLRYFELNSCNLNDDFFSAAFMQLATVTSLHFREVNITFLPECIKEFHCLNYLNVTRCKRLEEIRGVPPNLKIFRAIHCTSLTSSGSSMLLNQQLHEVGETDFIFRGGSIPSWFDKQSRGPSISFWFRHKFPPKVLCLTVAPLLDLVAEMIRPMVLINDKVQEHTFKPIDEVRLELDHMHLFGVRELHFDDGLMEMPLEKEWKHVEVTYEGLVDTSLIKAIGIHVVKEESMGMKDIRFDDPYTSTKVWPCNFFIAFLPFFFLFSLALVLFTSFMAYPTQL 907
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun4g00577 907 Gene3D - 181 265 IPR042197 -
Viun4g00577 907 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 4 694 IPR044974 GO:0006952
Viun4g00577 907 SUPERFAMILY L domain-like 384 717 - -
Viun4g00577 907 SMART AAA_5 44 179 IPR003593 GO:0016887
Viun4g00577 907 PRINTS Disease resistance protein signature 47 62 - -
Viun4g00577 907 PRINTS Disease resistance protein signature 123 137 - -
Viun4g00577 907 PRINTS Disease resistance protein signature 526 542 - -
Viun4g00577 907 PRINTS Disease resistance protein signature 216 230 - -
Viun4g00577 907 Gene3D Ribonuclease Inhibitor 356 545 IPR032675 -
Viun4g00577 907 Gene3D Ribonuclease Inhibitor 546 726 IPR032675 -
Viun4g00577 907 Gene3D - 28 176 IPR027417 -
Viun4g00577 907 SUPERFAMILY "Winged helix" DNA-binding domain 252 359 IPR036390 -
Viun4g00577 907 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 13 275 IPR027417 -
Viun4g00577 907 Pfam NB-ARC domain 36 239 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun4g00577 Viun-Chr4 3735344 3738481 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun4g00577 24 583 WRKY Transcription Factor Family AT4G12020 33.333 4.22e-66 240
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun4g00577 - - vun:114181898 1783.84