Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Viun4g00574 | ATGTTTTCCTCTTCCTTAACCTACGATGTGTTCCTCAGCTTCAGAGGGGAAGACGCACTCCACGGTTTCACCGGCAATCTCTACAAAGCTCTCTGTGACAGGGGAATTCACACCTTCATCGATGATGATGACCTTGAGAGTGGAGAGGAAATCTCACCAGCACTTCTGAAAGTAATTGAAGAGTCTAGGATTGCCATCGTTGTGCTCTCTCAAAACTATGCTTCTTCCTGTTTCTGCTTGGATGAACTTGCAGTCATCCTTAACTGCAAGAATAAAGGGCTACATGTTATACCGGTATTTTATAAGGTGGATCCTTCAGACGTGAGACACCAGAAAGGGAGTTATGGAGAAGCATTGACTAAGCATCAGATAAGATTCAAAGATATGGAGAAGGTGCAGAAATGGAAGATGGCTCTGCGTCAAGTAGCTAACTTGTCTGGCTATCATTTCGAAGACGGAGTTGGATATGAATACAAGTTTATTAAGAGAATTGCTGAGGATGTCAAGCACAAGATTATTCGTGATTCTTTTACACATGTTTCGGATTACCCAATTGGACTAGACTCACAAGTGCTAGAAGTAAGGAAAGTTTTGGAGTTTGGAACTGAGGATGGTGTTCACATGATAGGAATCCACGGGATGGGTGGGATAGGAAAATCAACACTTGCTCGAGCTGTCTACAATGATTTAATTGGTGAGAATTTTGATGGATTGTGTTTTCTTGAAAACGTGAGAGAAAACACAAACAAACATGGGTTAAAACACCTGCAAAGCATCCTTCTATCACAGATATTAGGAGATAAGGACATCTACTTCACAAGTATGCAACAAGGAATTTCTACGATAAAGTGTAGGTTGAAGATGAAGAAGGTTCTCTTGATTCTGGATGATGTTGACAAGCCCGAGCAATTAGAAGCAGTTGCTGGAGGATGTGACTGGTTTGGTCCTGGCAGCAGAATCATCATCACAACTCGGAACAAACAATTGTTGGAAAACCATAGAGTTACTATGACATATGAGGTGAAGGAATTGAATAATAATGATGCTCTTCAGCTGCTTAAATGGAAAGCTTTCAGGAATGTAAAGGTTGATCCAGAGTATGAGTTAGTCTTGAATAGTCTTTTAACTTATGCTTCTGGCCTTCCACTGGCTTTAGAAGTAATAGGAGGCAGCTTGGTCGGAAAAAGTATAGAAGGATGGAAGACCACTGTCAAACAATATGAAATGATTCCCAAAATGGAAATCCTAAGTATACTTAAAGTAAACTTTGATGCTTTGGAGGAAGAAGAGAAGAGTGTTTTTCTTGATATTTCTCGTTTCTTAAATGTATATGCGCCGACAGAGGTTGAAGATATACTTAATGCTTGTTATGGTCGTAGCATGAAACATCACATTGGAATGCTGGTTGAAAAATCTCTGTTGAAGTATGATTATTTTGATAATAGACTTACAATGCATGACTTGGTAAGGGACATGTGTATAAGCATTGCCTGGGAGGAATTACGGAAAGAGCCGGGGAAGAACAGTGGATTATGGTTACATAAAGATGTGATTCATGTTTCGAATAACACTAGAATAAAAGGATTGAATGCAAGCAGCTTCAAGAGGATGAAAACCCTCCAAAAACTTCATAAAAAATTTCAGTTTTTCAATCATTTTCTTCGAAGTTCGAGAGCATTGATATGGTTCAGATTTTCTTCAAATTGTTTACCATCTGCGTTGGATAACTTATTGAAGAAGTTCGAGAATCTAACCGTCATGAGTTTTGACGACTGCAAAATTTTGACGCACATTCCTGATGTATCTGATCTCCCAAATTTGAAGGAACTTTCATTTAAAGAGTGTGAGAATTTAATTACAGTTCACGACTCAGTTGGTTTTCTGACTAAACTTAAAATATTGAGGGTTGTTGGTTGCAGCAAGCTTATTAGTTTTCCACCTCTCAACTTAAACTCTCTCGAAAGACTAGAACTTTCAAATTGTTCCAGTCTTGAGAACTTTCAGAGATTTACCACAGAATGGGAATCTGCTTTAAATCAATATGATTCTGTTGGACTGGAGTCACGTTCAGATGCATTCAGCTACGATGTGTTCCTCAGCTTCAGAGGCTTAGACACACGCTATGGTTTTACGGGCTATCTCTACAAAGCTCTTCATGACAGTGGAATCCACACTTTCATTGCTGATGAAAACCTTCAGAGAGGAGAGGAAATTACACCAACAACTGTGAAAGCAATTAAAGAGTCCAGGATTGCTATCACTGTGCTTTCTGTAAACTATGCTTCTTCCACCTGTTGCTTTGATGAACTTGCAACCATTCTTGACTGCCTTAAGAGAAAAAGACTTCTGGTTTTACCAGTCTTTTATTATGTGGATCCTACACTGGTGCAATTGCAGAAAGACAGTTTTAGAGAAGCCTTGACTAAACATGAGAAGAGGCTCAAGCATGACATGGAAAAGTTGTTGAAATGGAAGATGCTTCTTCATCAAGTAGCTAAGTTGTTTTTCTTTCATATCGACCATGGGAATGGATATGAATATGAGTTTATTGGGAAGATTGTGGAGTGGGTCTCCAAGAAGATTAATCCTGGTCATTACCCAGTTGGAATAGAGTCAAAAGTGCAAGAAGTAATGAAACTTTTGGATGTTGGATGTGATGGTGGTGTCCACATGATAGGGATTCATGGAATTGGCGGGGTTGGAAAATCAACTCTTGCCAAAGAAGTTTATAATGATTTGATTTCGTACAAGTTTGATGCTTCATGTTTTATTGAAAACGTGAGAGAAAAATCAAACAAGCATGGGTTACAATATCTTCAAAGCATCATTCTTCTGAATTTACTTGGAGAGAAGGACATGAAGTTAACAAGTGTGCAACAAGGGATTTCAGTGATACAACGTAGGCTCCAGAAAAAGAAGGTTCTCTTGATTCTAGATGATGTTGACAAGGAGGAGCAATTGCAGGCAGTTGTTGGAAGAGCTGATTGGTTTGGTCCTGGCAGCAGAGTCATAATCACAACACGAGATGAACAGCTGTTAGCCTCCCATAATGTTCAAACAACTTATGAGGTGAAGGGATTAAATAACGATGAGGCTCTTCAATTGCTTAAATGGAAAGCTTTTAAAAAGCATTACTTTGATCCGAGTTATGAGGAGCTCCTGAATCATGTAGTAACTTTTGCTGCTGGCATTCCATTAGCATTGGAAGTAATAGGTTCCAACTTGTATGGAAAAAGTGTAGAAGAATGGAAACCAGTCATCCATAAATTAAAAAAATGTCCTAATAATCCGGTTGAAACAATACTTAAAGCAAGCTTTGATTCTTTGGAGGAAAAAGAAAGGAGTGTTTTTCTTGACTTTGCTTGTTGCTTCAAAGGATATGAATTGGCAGAGGTCGAAGATATACTTCAAGCTCAGTATGGTCAGAACATGAAGTGTTACATTGACATATTGGTTGACAAATCTCTAGTAAAGCTTATTCATGGTACAAAACCTTGTTATGATAGAGTTACATTGCATGACTTGATTGAGGACATGGGTAAAGATATTGTCCAACAGGAATCATTGTTAGAGCCAGGTCAGCGTAGCAGGTTATGGTTACTGGAAGATGTTAGAGAAGTTTTAGAAAACAACAGGGGAACTAACAAAATTGAAATCATATGTCTGGATTTCCCCATATTTGATCAAGAAGAAGGAGTAGAATGGAATGGAAAGGCCTTCCAGAATATGCAGAACCTCAGAACACTTATTATTAGAAATGGTAGTTTTTCGAAAGGTCCAGAATATCTACCAGATAATTTGAGAGTGCTTGAATGGTGGAGATATCCGTCAAATAGTTTACCATCTGATTTTCATCCAAAGGAACTTGCCATATGCAAGTTACCCTGCAGTAGTATTTCGACAATTGAGTTGACAAACTTATTGAAGAAGTCGGTGAATCTAAGAGTTTTTAAATTTTCAAATGCAAATGTTTAA | 3975 | 0.3836 | MFSSSLTYDVFLSFRGEDALHGFTGNLYKALCDRGIHTFIDDDDLESGEEISPALLKVIEESRIAIVVLSQNYASSCFCLDELAVILNCKNKGLHVIPVFYKVDPSDVRHQKGSYGEALTKHQIRFKDMEKVQKWKMALRQVANLSGYHFEDGVGYEYKFIKRIAEDVKHKIIRDSFTHVSDYPIGLDSQVLEVRKVLEFGTEDGVHMIGIHGMGGIGKSTLARAVYNDLIGENFDGLCFLENVRENTNKHGLKHLQSILLSQILGDKDIYFTSMQQGISTIKCRLKMKKVLLILDDVDKPEQLEAVAGGCDWFGPGSRIIITTRNKQLLENHRVTMTYEVKELNNNDALQLLKWKAFRNVKVDPEYELVLNSLLTYASGLPLALEVIGGSLVGKSIEGWKTTVKQYEMIPKMEILSILKVNFDALEEEEKSVFLDISRFLNVYAPTEVEDILNACYGRSMKHHIGMLVEKSLLKYDYFDNRLTMHDLVRDMCISIAWEELRKEPGKNSGLWLHKDVIHVSNNTRIKGLNASSFKRMKTLQKLHKKFQFFNHFLRSSRALIWFRFSSNCLPSALDNLLKKFENLTVMSFDDCKILTHIPDVSDLPNLKELSFKECENLITVHDSVGFLTKLKILRVVGCSKLISFPPLNLNSLERLELSNCSSLENFQRFTTEWESALNQYDSVGLESRSDAFSYDVFLSFRGLDTRYGFTGYLYKALHDSGIHTFIADENLQRGEEITPTTVKAIKESRIAITVLSVNYASSTCCFDELATILDCLKRKRLLVLPVFYYVDPTLVQLQKDSFREALTKHEKRLKHDMEKLLKWKMLLHQVAKLFFFHIDHGNGYEYEFIGKIVEWVSKKINPGHYPVGIESKVQEVMKLLDVGCDGGVHMIGIHGIGGVGKSTLAKEVYNDLISYKFDASCFIENVREKSNKHGLQYLQSIILLNLLGEKDMKLTSVQQGISVIQRRLQKKKVLLILDDVDKEEQLQAVVGRADWFGPGSRVIITTRDEQLLASHNVQTTYEVKGLNNDEALQLLKWKAFKKHYFDPSYEELLNHVVTFAAGIPLALEVIGSNLYGKSVEEWKPVIHKLKKCPNNPVETILKASFDSLEEKERSVFLDFACCFKGYELAEVEDILQAQYGQNMKCYIDILVDKSLVKLIHGTKPCYDRVTLHDLIEDMGKDIVQQESLLEPGQRSRLWLLEDVREVLENNRGTNKIEIICLDFPIFDQEEGVEWNGKAFQNMQNLRTLIIRNGSFSKGPEYLPDNLRVLEWWRYPSNSLPSDFHPKELAICKLPCSSISTIELTNLLKKSVNLRVFKFSNANV | 1324 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Viun4g00574 | 1324 | ProSiteProfiles | TIR domain profile. | 693 | 861 | IPR000157 | GO:0007165 | |
Viun4g00574 | 1324 | ProSiteProfiles | TIR domain profile. | 6 | 172 | IPR000157 | GO:0007165 | |
Viun4g00574 | 1324 | Pfam | TIR domain | 8 | 171 | IPR000157 | GO:0007165 | |
Viun4g00574 | 1324 | Pfam | TIR domain | 695 | 861 | IPR000157 | GO:0007165 | |
Viun4g00574 | 1324 | SUPERFAMILY | "Winged helix" DNA-binding domain | 414 | 519 | IPR036390 | - | |
Viun4g00574 | 1324 | SUPERFAMILY | Toll/Interleukin receptor TIR domain | 688 | 834 | IPR035897 | - | |
Viun4g00574 | 1324 | Gene3D | Ribonuclease Inhibitor | 513 | 681 | IPR032675 | - | |
Viun4g00574 | 1324 | Gene3D | - | 171 | 338 | IPR027417 | - | |
Viun4g00574 | 1324 | Gene3D | - | 860 | 1022 | IPR027417 | - | |
Viun4g00574 | 1324 | Gene3D | - | 688 | 859 | IPR035897 | - | |
Viun4g00574 | 1324 | PRINTS | Disease resistance protein signature | 378 | 392 | - | - | |
Viun4g00574 | 1324 | PRINTS | Disease resistance protein signature | 208 | 223 | - | - | |
Viun4g00574 | 1324 | PRINTS | Disease resistance protein signature | 648 | 664 | - | - | |
Viun4g00574 | 1324 | PRINTS | Disease resistance protein signature | 285 | 299 | - | - | |
Viun4g00574 | 1324 | SUPERFAMILY | "Winged helix" DNA-binding domain | 1098 | 1209 | IPR036390 | - | |
Viun4g00574 | 1324 | Gene3D | - | 7 | 170 | IPR035897 | - | |
Viun4g00574 | 1324 | SMART | AAA_5 | 205 | 348 | IPR003593 | GO:0016887 | |
Viun4g00574 | 1324 | SMART | AAA_5 | 888 | 1030 | IPR003593 | GO:0016887 | |
Viun4g00574 | 1324 | SUPERFAMILY | L domain-like | 481 | 668 | - | - | |
Viun4g00574 | 1324 | Pfam | NB-ARC domain | 871 | 1109 | IPR002182 | GO:0043531 | |
Viun4g00574 | 1324 | Pfam | NB-ARC domain | 195 | 407 | IPR002182 | GO:0043531 | |
Viun4g00574 | 1324 | SMART | till_3 | 7 | 145 | IPR000157 | GO:0007165 | |
Viun4g00574 | 1324 | SMART | till_3 | 694 | 834 | IPR000157 | GO:0007165 | |
Viun4g00574 | 1324 | Gene3D | - | 343 | 427 | IPR042197 | - | |
Viun4g00574 | 1324 | Gene3D | - | 1026 | 1110 | IPR042197 | - | |
Viun4g00574 | 1324 | FunFam | Disease resistance protein (TIR-NBS-LRR class) | 691 | 863 | - | - | |
Viun4g00574 | 1324 | FunFam | Disease resistance protein (TIR-NBS-LRR class) | 4 | 174 | - | - | |
Viun4g00574 | 1324 | SUPERFAMILY | L domain-like | 1235 | 1321 | - | - | |
Viun4g00574 | 1324 | PANTHER | LEUCINE-RICH REPEAT-CONTAINING PROTEIN | 8 | 669 | IPR044974 | GO:0006952 | |
Viun4g00574 | 1324 | SUPERFAMILY | Toll/Interleukin receptor TIR domain | 3 | 148 | IPR035897 | - | |
Viun4g00574 | 1324 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 866 | 1119 | IPR027417 | - | |
Viun4g00574 | 1324 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 171 | 437 | IPR027417 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Viun4g00574 | Viun-Chr4 | 3726387 | 3731762 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Viun4g00574 | 185 | 653 | WRKY Transcription Factor Family | AT5G45050 | 28.044 | 3.13e-42 | 167 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Viun4g00574 | - | - | vun:114181896 | 2610.1 |