Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun4g00563 CTTTTGCTTCTTGCATTCCATTGTGTTGAAGAAGAATGGGAATCTGCTTTAAATCATGATTCTGTTGGACTGGAGTCAAGTTCAGATGCATTCAGCTACGATGTGTTCCTCAGCTTCAGAGGCTTAGACACACGCTATGGTTTTACGGGCTATCTCTACAAAGCTCTTCATGACAGTGGAATCCACACTTTCATTGATGATGAAAACCTTCAGAGAGGAGAGGAAGTTACACCAACAACTGTGAAAGCAATTAAAGAGTCCAGGATTGCTATCACTGTGCTTTCTGTAAACTATGCTTCTTCCACCTGTTGCTTTGATGAACTTGCAACCATTCTTGACTGCCTTAAGAGAAAAAGACTTCTGGTTTTACCAGTCTTTTATTATGTGGATCCTACACTGGTGCAATTGCAGAAAGGCAGTTTTGGAGAAGCCTTGACTAAACATGAGAAGAGGCTCAAGCATGACATGGAAAAGTTGTTGAAATGGAAGATGCTTCTTCATCAAGTAGCTAAGTTGTTTTTCTTTCACATCGACCATCGGAATGCATATGAATATGAGTTTATTGGGAAGATTGTGGAGTGGGTCTCCAAGAAGATTAATCCTGGTCATTACCCAGTTGGAATAGAGTCAAAAGTGCAAGATGTAATGAAACTTTTGGATGTTGGATGTGATGGTGGTGTCCACATGATAGGGATTCATGGAATTGGCGGGGTTGGGAAATCAACTCTTGCCAAAGAAGTTTATAATGATTTGATTTCGTACAAGTTTGATGCTTCATGTTTTATTGAAAACGTGAGAGAAAAATCAAACAAGCATGGGTTACAATACCTTCAAAGCATCATTCTTCTGAATTTACTTGGAGAGAAGGACATGAAGTTAACAAGTGTGCAACAAGGAATTTCAGTGATACAACGTAGGCTTCAGAAAAAGAAGGTTCTCTTGATTCTAGATGATGTTGACAAGGAGGAGCAATTGCAGGCAGTTGTTGGAAGAGCTGATTGGTTTGGTCCTGGCAGCAGAGTCATAATCACAACACGAGATGAACAGCTGTTAGCCTCCCATAATGTTCAAACAACTTATGAGGTGAAGGGATTAAATAACAATGATGCTCTTCAATTGCTTAAATGGAAAGCTTTTAAAAAGCATTACTTTGATCCAAGTTATGAGGATCTCCTGAATCATGTAGTAACTTTTGCTGCTGGCATTCCATTAGCATTGGAAGTAATAGGTTCCAACTTGTATGGAAAAAGTGTAGAAGAATGGAAACCAGTCATCCATAAATTAAAAAAATGTCCTAATAATCCGGTTGAAACAATACTTAAAGCAAGCTTTGATTCTTTGGAGGAAAAAGAAAAGAGTGTTTTTCTTGACTTTGCTTGTTGCTTCAAAGGATATGAATTGGCAGAGGTCGAAGATATACTTCAAGCTCAGTATGGTCAGAACATGAAGTGTTACATTGACATATTGGTTGACAAATCTCTAGTAAAGCTTATTCATGGTACAAAACCTTGTTATGATAGAGTTACATTTCATGACTTGATTGAGGACATGGGTAAAGATATTGTCCGACAGGAATCATTGATAGAGCCAGGTGAGCGTAGCAGGTTATGGTTACTGGAAGATGTTAGAGAAGTTTTAGAAAACAACAGGGGAACTACCAAAACTGAAATCATATGTCTGGATTTCCCCATATTTGATCAAGAAGAAGTAGTAGAATGGGATGGAAAGGCCTTCCAGAATATGCAGAACCTCAGAACACTTATTATTAGAAATGGTAGTTTTTCGAAAGGTCCAGAATATCTACCAGATAATTTGAGAGTGCTTGAATGGTGGAGATATCCGTCAAATAGTTTACCATCTGATTTTCATCCAAAGGAACTTGCCCTATGCAAGTTACCCTGCAGTAGTATTTCGACAATTGAGTTGATAAACTTATTGAAGAAGTTGGTGAATCTAAGAGTTTTGAAATTCTCAAATGCAAATGTTTAA 1989 0.3801 LLLLAFHCVEEEWESALNHDSVGLESSSDAFSYDVFLSFRGLDTRYGFTGYLYKALHDSGIHTFIDDENLQRGEEVTPTTVKAIKESRIAITVLSVNYASSTCCFDELATILDCLKRKRLLVLPVFYYVDPTLVQLQKGSFGEALTKHEKRLKHDMEKLLKWKMLLHQVAKLFFFHIDHRNAYEYEFIGKIVEWVSKKINPGHYPVGIESKVQDVMKLLDVGCDGGVHMIGIHGIGGVGKSTLAKEVYNDLISYKFDASCFIENVREKSNKHGLQYLQSIILLNLLGEKDMKLTSVQQGISVIQRRLQKKKVLLILDDVDKEEQLQAVVGRADWFGPGSRVIITTRDEQLLASHNVQTTYEVKGLNNNDALQLLKWKAFKKHYFDPSYEDLLNHVVTFAAGIPLALEVIGSNLYGKSVEEWKPVIHKLKKCPNNPVETILKASFDSLEEKEKSVFLDFACCFKGYELAEVEDILQAQYGQNMKCYIDILVDKSLVKLIHGTKPCYDRVTFHDLIEDMGKDIVRQESLIEPGERSRLWLLEDVREVLENNRGTTKTEIICLDFPIFDQEEVVEWDGKAFQNMQNLRTLIIRNGSFSKGPEYLPDNLRVLEWWRYPSNSLPSDFHPKELALCKLPCSSISTIELINLLKKLVNLRVLKFSNANV 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun4g00563 662 Gene3D Ribonuclease Inhibitor 543 662 IPR032675 -
Viun4g00563 662 FunFam Disease resistance protein (TIR-NBS-LRR class) 29 201 - -
Viun4g00563 662 Gene3D - 364 448 IPR042197 -
Viun4g00563 662 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 33 659 IPR044974 GO:0006952
Viun4g00563 662 PRINTS Disease resistance protein signature 229 244 - -
Viun4g00563 662 PRINTS Disease resistance protein signature 306 320 - -
Viun4g00563 662 PRINTS Disease resistance protein signature 399 413 - -
Viun4g00563 662 PRINTS Disease resistance protein signature 647 662 - -
Viun4g00563 662 ProSiteProfiles TIR domain profile. 31 199 IPR000157 GO:0007165
Viun4g00563 662 Pfam TIR domain 33 199 IPR000157 GO:0007165
Viun4g00563 662 Gene3D - 26 196 IPR035897 -
Viun4g00563 662 SMART till_3 32 172 IPR000157 GO:0007165
Viun4g00563 662 SUPERFAMILY L domain-like 571 660 - -
Viun4g00563 662 SUPERFAMILY "Winged helix" DNA-binding domain 436 547 IPR036390 -
Viun4g00563 662 Gene3D - 197 360 IPR027417 -
Viun4g00563 662 SUPERFAMILY Toll/Interleukin receptor TIR domain 26 172 IPR035897 -
Viun4g00563 662 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 204 457 IPR027417 -
Viun4g00563 662 Pfam NB-ARC domain 209 448 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun4g00563 Viun-Chr4 3697370 3699957 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun4g00563 206 640 WRKY Transcription Factor Family AT5G45050 34.549 1.45e-56 206
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun4g00563 - - vun:114181896 1236.86