Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun4g00523 ATGGCTAGTTTTGAAAATGGTGAGCTGCAGAAGATATCAGAAGAAACTGATGTACAACCATATCATGAAACTTTGCATTCTAAATTTCAAAGGCTTTTAAGTGCATCAGTTTCTATTCCCATGGAGTCATATGAGATAGAAACTAGTCTTGTGGGAGATAGTGGTTCATTGTATGCTACACCAGAAACTGATAATCTTATGCAGCATAGTATAGTTGTAACAGGAAACAAAACAGAGGAGAGCACAGATGAAAGCTATGATAGCATAAATGAACATTTACTGAGATCTGGGAAACTGGGAATTTGTAATGATCCTTATTGTACTACTTGTCCTTCTTACTTCAAGTCTTCTCAGCTAAGAAATCCAAAAGCTTTGAATATACCTGATCCGAAGAATGCTCTTAATGGGGATGCCAAAGGATTCACCAGAAAATTTTACTCTCTATGTTCATCTTTTGTTCCTGGAGTTATGAATCCTCACTCTAAATTCATACAACATTGGAACAAGGTTCTTGCCAGTTTTTGCTTGGTTGCAATTTTTGTGGATCCATTATTTTTCTTCTTACTCTATGTTCGGCAGGATCATAATTGTATAGTTATCAACTGGAAATTGACAAAAGCACTTGTTATAGTTAGAAGCATGAACGACTTCATATATTTCCTTCACATTCTTCTCCAGTTTAGGTTGGCTTTTGTTTCTCCTGAGTCAAGGGTGGTTGGTGCTGGAGATTTAGTTGATCATCCAAAGGAAATTGCATTTCATTACCTGAAGGGTTATTTTCTTATTGACTTGTTTGTTGTATTTCCTCTTCCTCAGATAATGTTATTGTCTGTACTACCAAAATCATTGAGGGGAGCAAATTATGCTAAGAATGTTCTGCGTGCAGCGATCCTAGTGCAGTATATTCCCAGATTATTCAGATTTCTGCCTATGCTGTTTGGTCAATCTCCAGCAGGATTCATATTTGAGTCAGCATGGGCAAATTTCATTATAAATCTTCTCATTTTCATTCTAGCTAGCCATGTTGTTGGCTCTATCTGGTACCTATTTGCTCTACAGAGGGTTAATCAATGTTTTCGAAATGCGTGCCAAAGTTCTAATATCCCTGGATGTCTGGCATTCATTGATTGTGGACATAGCCATGTTGGGGAAAATCAGCTTGGCTTATCATCAAACCAGTGGAACAACAATGCAGATGCTATTGCATGTTGGAATTCCTCTTCCACAGGTTCTTTTGCTTATGGGATTTATAACAATGCTGTTCCTCTTACTACACAAACAGACATCGTCACCAAATACATATATGCTCTATTTTGGGGGTTACAGCAAATCAGTACTCTGGCTGGTAACCAAACACCAAGCGACTTTGTGTATGAAACCCTTTTTACTATAGCCATCATAGGAATGGGACTTTTGCTTTTTGCGCTTCTCATTGGAAACATTCAGAACTTTCTTCAAGGTCTTGGACGGAGGAGGCTAGAAATGCAACTTAGACGCGGTGATGTTGAGCAATGGATGAGTCATAGGCGCTTACCAGAATACCTCAGAAGGAGAGTACGAGAGGCTGAACGGTATAGTTGGACTGCAACAAGAGGGGTGAATGAAGCAACACTAATGGAGAACTTTCCAGAAGACCTCCAAATGGATATAAGACGCCATCTCTTCAAATTTGTTAAGAAAGTTCGAATATTTGCTCTGATGGATGAACCTGTCTTAGATGCCATTTGTGCGAGACTGAGACAAGCTACTTACATTAAAGGAAGTAGAATTTTGAGTCAAGGTAGTGTGGTAGAGAAGATGGTATTCGTGGTGCGTGGCAAATTGGAGAGCATTGGAGAAGATGGTATTAGAATTCCTTTATCTGAAGGAGATGTTTGTGGTGAAGAACTTCTGACATGGTATCTTGAGCATTCTTCTGTCAGCGCAGTTCATCAATTTGAGTATGCAGATGGCAGAAGAGTAAGGCTTCCAGGACAGAAGTTGCTTAGCAACAGAACAGTAAGATGCTTAACAAATGTAGAAGTACTTTCACTGAGAGCAGAAAACCTTGAAGAAGTCACAATCCTTTTCACAAGATTCTTGCGTAGTTTGCGTGTTCAAGGAGCCTTAAGGTATGAATCACCTTATTGGAGATCCCTTGCAGCAATCCGTATTCAGGTTGCATGGAGATACAGAAAGAAACGATTAAGCCATGTTAATTCAGACTTTCAAAATAAACATTGA 2223 0.39 MASFENGELQKISEETDVQPYHETLHSKFQRLLSASVSIPMESYEIETSLVGDSGSLYATPETDNLMQHSIVVTGNKTEESTDESYDSINEHLLRSGKLGICNDPYCTTCPSYFKSSQLRNPKALNIPDPKNALNGDAKGFTRKFYSLCSSFVPGVMNPHSKFIQHWNKVLASFCLVAIFVDPLFFFLLYVRQDHNCIVINWKLTKALVIVRSMNDFIYFLHILLQFRLAFVSPESRVVGAGDLVDHPKEIAFHYLKGYFLIDLFVVFPLPQIMLLSVLPKSLRGANYAKNVLRAAILVQYIPRLFRFLPMLFGQSPAGFIFESAWANFIINLLIFILASHVVGSIWYLFALQRVNQCFRNACQSSNIPGCLAFIDCGHSHVGENQLGLSSNQWNNNADAIACWNSSSTGSFAYGIYNNAVPLTTQTDIVTKYIYALFWGLQQISTLAGNQTPSDFVYETLFTIAIIGMGLLLFALLIGNIQNFLQGLGRRRLEMQLRRGDVEQWMSHRRLPEYLRRRVREAERYSWTATRGVNEATLMENFPEDLQMDIRRHLFKFVKKVRIFALMDEPVLDAICARLRQATYIKGSRILSQGSVVEKMVFVVRGKLESIGEDGIRIPLSEGDVCGEELLTWYLEHSSVSAVHQFEYADGRRVRLPGQKLLSNRTVRCLTNVEVLSLRAENLEEVTILFTRFLRSLRVQGALRYESPYWRSLAAIRIQVAWRYRKKRLSHVNSDFQNKH 740
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun4g00523 740 SUPERFAMILY cAMP-binding domain-like 491 693 IPR018490 -
Viun4g00523 740 SMART cnmp_10 563 702 IPR000595 -
Viun4g00523 740 Gene3D - 168 487 - -
Viun4g00523 740 SUPERFAMILY Voltage-gated potassium channels 159 492 - -
Viun4g00523 740 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 102 730 - -
Viun4g00523 740 Gene3D Helix hairpin bin 490 555 - -
Viun4g00523 740 ProSiteProfiles cAMP/cGMP binding motif profile. 563 631 IPR000595 -
Viun4g00523 740 CDD CAP_ED 563 686 IPR000595 -
Viun4g00523 740 Pfam Ion transport protein 169 490 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Viun4g00523 740 Gene3D Jelly Rolls 561 692 IPR014710 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun4g00523 Viun-Chr4 3333421 3339106 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun4g00523 79 641 Ion Channels AT3G17700 61.217 0.0 688
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun4g00523 K05391 - gsj:114390051 1251.88