Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun4g00522 ATGGCTAGTTTTGAAAATGGTGAGCTGCAGAAGATATCAGAAGAAACTGATGTACAACCATATCATGAAACTTTGCATTCTAAATTTCAAAGGCTTTTAAGTGCATCAGTTTCTATTCCCATGGAGTCATATGAGATAGAAACTAGTCTTGTGGGAGATAGTGGTTCATTGTATGCTACACCAGAAACTGATAATCTTATGCAGCATAGTATAGTTGTAACAGGAAACAAAACAGAGGAGAGCACAGATGAAAGCTATGATAGCATAAATGAACATTTACTGAGATCTGGGAAACTGGGAATTTGTAATGATCCTTATTGTACTACTTGTCCTTCTTACTTCAAGTCTTCTCAGCTAAGAAATCCAAAAGCTTTGAATATACCTGATCCGAAGAATGCTCTTAATGGGGATGCCAAAGGATTCACCAGAAAATTTTACTCTCTATGTTCATCTTTTGTTCCTGGAGTTATGAATCCTCACTCTAAATTCATACAACATTGGAACAAGGTTCTTGCCAGTTTTTGCTTGGTTGCAATTTTTGTGGATCCATTATTTTTCTTCTTACTCTATGTTCGGCAGGATCATAATTGTATAGTTATCAACTGGAAATTGACAAAAGCACTTGTTATAGTTAGAAGCATGAACGACTTCATATATTTCCTTCACATTCTTCTCCAGTTTAGGTTGGCTTTTGTTTCTCCTGAGTCAAGGGTGGTTGGTGCTGGAGATTTAGTTGATCATCCAAAGGAAATTGCATTTCATTACCTGAAGGGTTATTTTCTTATTGACTTGTTTGTTGTATTTCCTCTTCCTCAGATAATGTTATTGTCTGTACTACCAAAATCATTGAGGGGAGCAAATTATGCTAAGAATGTTCTGCGTGCAGCGATCCTAGTGCAGTATATTCCCAGATTATTCAGATTTCTGCCTATGCTGTTTGGTCAATCTCCAGCAGGATTCATATTTGAGTCAGCATGGGCAAATTTCATTATAAATCTTCTCATTTTCATTCTAGCTAGCCATGTTGTTGGCTCTATCTGGTACCTATTTGCTCTACAGAGGGTTAATCAATGTTTTCGAAATGCGTGCCAAAGTTCTAATATCCCTGGATGTCTGGCATTCATTGATTGTGGACATAGCCATGTTGGGGAAAATCAGCTTGGCTTATCATCAAACCAGTGGAACAACAATGCAGATGCTATTGCATGTTGGAATTCCTCTTCCACAGGTTCTTTTGCTTATGGGATTTATAACAATGCTGTTCCTCTTACTACACAAACAGACATCGTCACCAAATACATATATGCTCTATTTTGGGGGTTACAGCAAATCAGTACTCTGGCTGGTAACCAAACACCAAGCGACTTTGTGTATGAAACCCTTTTTACTATAGCCATCATAGGAATGGGACTTTTGCTTTTTGCGCTTCTCATTGGAAACATTCAGAACTTTCTTCAAGGTCTTGGACGGAGGAGGCTAGAAATGCAACTTAGACGCGGTGATGTTGAGCAATGGATGAGTCATAGGCGCTTACCAGAATACCTCAGAAGGAGAGTACGAGAGGCTGAACGGTATAGTTGGACTGCAACAAGAGGGGTGAATGAAGCAACACTAATGGAGAACTTTCCAGAAGACCTCCAAATGGATATAAGACGCCATCTCTTCAAATTTGTTAAGAAAGTTCGAATATTTGCTCTGATGGATGAACCTGTCTTAGATGCCATTTGTGCGAGACTGAGACAAGCTACTTACATTAAAGGAAGTAGAATTTTGAGTCAAGGTAGTGTGGTAGAGAAGATGGTATTCGTGGTGCGTGGCAAATTGGAGAGCATTGGAGAAGATGGTATTAGAATTCCTTTATCTGAAGGAGATGTTTGTGGTGAAGAACTTCTGACATGGTATCTTGAGCATTCTTCTGTCAGCGCAGATGGCAGAAGAGTAAGGCTTCCAGGACAGAAGTTGCTTAGCAACAGAACAGTAAGATGCTTAACAAATGTAGAAGTACTTTCACTGAGAGCAGAAAACCTTGAAGAAGTCACAATCCTTTTCACAAGATTCTTGCGTAGTTTGCGTGTTCAAGGAGCCTTAAGGTATGAATCACCTTATTGGAGATCCCTTGCAGCAATCCGTATTCAGGTTGCATGGAGATACAGAAAGAAACGATTAAGCCATGTTAATTCAGACTTTCAAAATAAACATTGA 2202 0.3906 MASFENGELQKISEETDVQPYHETLHSKFQRLLSASVSIPMESYEIETSLVGDSGSLYATPETDNLMQHSIVVTGNKTEESTDESYDSINEHLLRSGKLGICNDPYCTTCPSYFKSSQLRNPKALNIPDPKNALNGDAKGFTRKFYSLCSSFVPGVMNPHSKFIQHWNKVLASFCLVAIFVDPLFFFLLYVRQDHNCIVINWKLTKALVIVRSMNDFIYFLHILLQFRLAFVSPESRVVGAGDLVDHPKEIAFHYLKGYFLIDLFVVFPLPQIMLLSVLPKSLRGANYAKNVLRAAILVQYIPRLFRFLPMLFGQSPAGFIFESAWANFIINLLIFILASHVVGSIWYLFALQRVNQCFRNACQSSNIPGCLAFIDCGHSHVGENQLGLSSNQWNNNADAIACWNSSSTGSFAYGIYNNAVPLTTQTDIVTKYIYALFWGLQQISTLAGNQTPSDFVYETLFTIAIIGMGLLLFALLIGNIQNFLQGLGRRRLEMQLRRGDVEQWMSHRRLPEYLRRRVREAERYSWTATRGVNEATLMENFPEDLQMDIRRHLFKFVKKVRIFALMDEPVLDAICARLRQATYIKGSRILSQGSVVEKMVFVVRGKLESIGEDGIRIPLSEGDVCGEELLTWYLEHSSVSADGRRVRLPGQKLLSNRTVRCLTNVEVLSLRAENLEEVTILFTRFLRSLRVQGALRYESPYWRSLAAIRIQVAWRYRKKRLSHVNSDFQNKH 733
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun4g00522 733 Gene3D Helix hairpin bin 490 555 - -
Viun4g00522 733 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 102 723 - -
Viun4g00522 733 Gene3D Jelly Rolls 561 685 IPR014710 -
Viun4g00522 733 Pfam Ion transport protein 169 490 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Viun4g00522 733 SUPERFAMILY Voltage-gated potassium channels 159 492 - -
Viun4g00522 733 Gene3D - 168 487 - -
Viun4g00522 733 CDD CAP_ED 563 679 IPR000595 -
Viun4g00522 733 SUPERFAMILY cAMP-binding domain-like 491 686 IPR018490 -
Viun4g00522 733 ProSiteProfiles cAMP/cGMP binding motif profile. 563 631 IPR000595 -
Viun4g00522 733 SMART cnmp_10 563 695 IPR000595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun4g00522 Viun-Chr4 3333346 3339106 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun4g00522 79 641 Ion Channels AT3G17700 61.217 0.0 687
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun4g00522 K05391 - gsj:114390051 1258.82