Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun4g00498 ATGAATGCTTCAATGAGGAAAAAGGTTCAAAGGAAGTGTAAGATAATAGGATACAATCTCAAAGTCGATGCTCTCGACGAGATCCTCTCCTTCGCATCTCACTTCGAAGGCAACGAGGACGAAGCAATCGATGTCCTCCTCAAAGAGCTCGAAAAATCTCTGAAATCCACCATAATCGACAAGGAGACAGTGCACCGTGTGGTGAGCCAACTGCTGGAAGTTGAGGCGGACGTGGAGGATAGCTCCGATCCTGGCACCAGCACTTCTTCCGCCTTGCGCGTTGTCGATGCGTTTGACTTCCCGAAGTATAAATACGACACTATCAGAAAGCAGTTCTACGAGCACACGGGCACCTTGTCTATTCACGGAGAAGCATCTGCAAAAGCAGCTTTGTACAGGGATAGGTTTCTGTTGTTGTCCCAGAGGCTCTCTCGTGACCAGCATTTTTCCAAACCTGCTTTTGAATCTGAATTTTCTCATTTCGGGAGTTGTGAGATATCTCCTATTCAATCTCTGGTTGGGCAAACAGGTAGAAAATGGGTGATGGGCGTAATATCTCAGCTGGAAGATGGCCATTACTATTTGGAAGACCTTACAGCTGCAGTTAAAATTAACTTGTCCAGTGCAAAGATAACTACAGGACTCTTTTCAGAGAACACTATAGTTGTGGTTGAAGGGGAGATGCTCGTGGAGGGTATTTTTCAGGTCTTAACATGTGGATTTCCTCCACTGGAGGATAGAGATAAGTCGCTGAAAGTACTTGCAGGGCATGACTTTTTTTGTGGTGGTACTTTAACGAAAGAGGAAACTATTAGACTGGAAGAGATGGAGAAAAGAGCAGTAAATGACATGTTTGTCATACTTTCTGACGTTTGGCTAGACAATGAAGAGGCTTTGACAAAGCTAGAGACTGTTCTGGATGGTTTTGAGAGTGTGGAAGTGGTTCCTTCCTTATTTGTTTTCATGGGAAACTTCTGTTCTAGGCCATGTAACCTTTCATTTCATTCTTATTCGAGCCTCAGAATGCAGTTTGGTAAGCTGGGGGAAATGATTGCTGCCCGTACACGGCTGAAAGAGCAGAGTAAATTCCTGTTCATCCCAGGTCCTGATGATGCAGGTCCTTCTACTGCTCTTCCTAGGTGCGCTCTACCAAAATATTTAACTGAAGAGCTCCAAAAGCACATACCCAATGCGATATTTTCAAGCAACCCTTGCAGGGTCAAATTTTATACCCAAGAAATTGTATTTTTCCGCCAGGATATGCTGCATAGAATGCGTCGCTCATGTCTGATGTCTCCTTCTACGGAAGAAACTGATGATCTTTTCCAACATCTTGTTGCTACCATAACCCATCAAAGTCATCTCTGTCCACTGCCCCTAACTGTTCAACCTATCATTTGGAATTATGACCATTGTCTTTATCTTTATCCAACTCCTCACACGATAGTTTTGGGTGACAGAAGTCAGCAGAAAGCATTCAAGTACACAGGAATCACTTGTTTTAATACTGGTTCCTTCTCTATTGACAGCACGTTTGTGGCATATCGTCCCTGCTCTCAAGAAGTTGAATTGTCAGCCTTGTAG 1584 0.4388 MNASMRKKVQRKCKIIGYNLKVDALDEILSFASHFEGNEDEAIDVLLKELEKSLKSTIIDKETVHRVVSQLLEVEADVEDSSDPGTSTSSALRVVDAFDFPKYKYDTIRKQFYEHTGTLSIHGEASAKAALYRDRFLLLSQRLSRDQHFSKPAFESEFSHFGSCEISPIQSLVGQTGRKWVMGVISQLEDGHYYLEDLTAAVKINLSSAKITTGLFSENTIVVVEGEMLVEGIFQVLTCGFPPLEDRDKSLKVLAGHDFFCGGTLTKEETIRLEEMEKRAVNDMFVILSDVWLDNEEALTKLETVLDGFESVEVVPSLFVFMGNFCSRPCNLSFHSYSSLRMQFGKLGEMIAARTRLKEQSKFLFIPGPDDAGPSTALPRCALPKYLTEELQKHIPNAIFSSNPCRVKFYTQEIVFFRQDMLHRMRRSCLMSPSTEETDDLFQHLVATITHQSHLCPLPLTVQPIIWNYDHCLYLYPTPHTIVLGDRSQQKAFKYTGITCFNTGSFSIDSTFVAYRPCSQEVELSAL 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun4g00498 527 Gene3D - 2 70 - -
Viun4g00498 527 PIRSF DNA_pol_epsilon_2 1 527 IPR016266 GO:0003677|GO:0006261|GO:0008622
Viun4g00498 527 Pfam DNA polymerase alpha/epsilon subunit B 285 490 IPR007185 GO:0003677|GO:0006260
Viun4g00498 527 PANTHER DNA POLYMERASE EPSILON SUBUNIT B 1 527 IPR016266 GO:0003677|GO:0006261|GO:0008622
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun4g00498 17 484 Core DNA Replication Machinery Family AT5G22110 69.936 0.0 697
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun4g00498 K02325 - gmx:100784116 907.131