Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun4g00486 ATGGCAGACACAAATTCAGTTGAAGTGATTTTGGATTTTCTGAGGAGGAATAGGTTCACCCGAGCTGAGGCGGCTTTGCGTAGTGAGCTCAGTAACTGCACTGATGTAAATGGTTTCTTGCAAAAGCTTACATTGGAAGAAAAGGACTTGCGTGGCGGGTTGCAGAGTGATAAGGGGAAGCCTGTTGTAGAAAATCATGGGTTGAATTCTCGTGACGGGGTTGAAGTTTCTAAAGAACTGATTGTGAAGGAAATAGAATGTGGGACTGGTAGAAATGCTGCAGAAGAAAGCAAGTGGAAAACTGTTGCTCCCACAGGGGAAAGGAATAAGTCTAGTGAAGTGGTTGGAACGAGTGAAAAAAACTTTACCTTCTCAAAGAGTTCGGAGGACAGTGTTCTTGATTTGTACTCATGGAAGTTTAATCCCACCAATGGTCCTGTTGAACCTTACCAAAATGATAGTGGAAGTAGGCCTAGTAATGCTTTGAAGGCACCGGTATCTCAACAATCAAAGTATCAAACTGGTGAAGTTCCTGCTGCAACCAACAGTAATGTGAAATCTGGGGAAGGGGAGGTAAATAGTATACCTGCCGAAAAAACAGCCTTGTGGCTTGGAAGTAGTGGTAGATCCTCTACAGAACCAAAGTATGATCTTATGCATAACAAAGAACCTAAGGAACTTGATATGCAGCTCAATTATAATGCTTCATCTCTTAAAGAGAACTTGACAGATAATCACTTGTCAAGAACTGATGAGAATGTGAATTCATCTACAGATCTATGGAAAGATTGTTCCGTGAAGACTGTTTTCCCTTTCTCAAAGGGGGATATGTCAACAAGCTACAACGGTTCAACTTTTTCTGACAGACAAGAGGAGAAGAGAAGGGCAGAAAACGGTGATGTTATGACATCAATAAAAGAGCAAGTGGATGAAGTAGGAAGAGCTCTTTACTTAGGAAAGTTGCAAGGCAGTTCTGGCAGCTTAAATTTTCCTCTTGATCTGGAGAATCCAAAGGAAGAGTTTCCTAGGCTTCCTCCTGTAAAAATCAAGTCAGAAGATAAGCCCTTGACTTTTAACTGGGGAGATAAGTTTGAGTCTGACGGACTGGCTGTGAAACTCACTGGTGCAGACAACTCCTTTCTTATAGGGTCATATTTGGATGTCCCTATTGGACAGGACATTAAAACTACTGGTGTGAGGAAGTCTATTGGGGGCAGCTGGCTGTCTGTAAGTCAAGGGATTTCTGAAGATACATCTGATCTTGTATCAGGTTTTGCAACAATTGGGGATGGGTTGAGTGAATCTGTTGATTATCCAAATGAATATTGGGACTCTGATGAATATGATGATGATGAAGATGTTGGGTACATGAGACAACCCATTGAGGATGAGGCCTGGTTTTTGGCACATGAAATTGATTACCCCAGTGATAATGAAAAGGGGACGGGGCATGGAAGTGTTCCAGATCCTCAAGAAAGAAGTCCAGCCAAAGATGAAGAGGATGATCAATCTTTTGCTGAGGAGGATTCTTATTTCTCTGGTGAGCAATATATTCTACCAAAAAATGTTGAGCCGGTCACTTCAGATGATCCGATTGGTCTAACGATTACCGAAATGTATGGAAGAACCAATGGTAACGATATAATGACTCAATATGATACACAACTGATGGACGTTGAAGAACTGAATCTGATGCATATAGAACCTGTCAGGCAGGGCTTTGTTACTCACCAAAATGATCTCATCATGCTGGGAGATGGGCGGGTTCTGAATCATGGTGCGAGGCCACGAATTGAGGACATGGAAGATGATCAGCATGGTTCAGTTAGATCAATTGGAGTGGGGATCAACAGTGATGCTGCTGATATTGGTAGTGAAGTGCATGGAAGTTTGATTGGTGGTAGTAGTGAGGGGGATTTAGAATATTTTCGTGATCATGATACTATGCACAGTGGCACCAAACACACTCATCAGGATTTGGACAAGAGTTTTTGTAACAAATCAGTTAAAAGTAACAAGAAAACTGACAAGAATGAATCAAATAAATATGTCATAGACAGTAATAAAGATGCATGCTCGCAGATAAAAACACATACTGATGGGAACTTTTCATTTCCCCAATCTCTTAGAGATGGCCAGATGATTCAGGCTGGCTCCAGTAAGTCTCCATGGACGAGTAATGGTAATGTAGATGAAACAGATGACTGTCTTAATGCCTTTGCGGGCTCTGATGACATGCTTTCATCTTGGAGGCGGAAGAGTAGTGATTCTTCACCTGTTAAGAGTTCTAGGGATGATAATAATGCTCTCGTGGTAAGATCCAGAAACTCTTCTCCAACTACAGTCTCAAATTACGGGTATACTGATGGAGAGCATGTCAAGCTAGAAAAGGATGAAAAGGTAAGTGTTGTAAGGGAAGACGATATAGGTGCATCACTAGAGGATGAAGAGGCAGCTGCTGTGCAAGAGCAGGTAAGACAAATAAAGGCTCAAGAGGAAGAATTTGAAACCTTCAATCTAAAGATCGTGCACAGGAAAAACAGAACTGGCTTCGAGGAGGACAAGAATTTCCATGTTGTTTTAAATTCCGTATTAGCTGGGCGCTATCATGTCACTGAGTATCTTGGATCTGCTGCATTTAGTAAAGCTATACAAGCTCATGACCTGCACACAGGCATGGATGTTTGTGTTAAGATTATAAAGAACAACAAAGACTTCTTTGACCAAAGCCTTGACGAGATCAAGCTTCTTAAGTATGTCAATAAGCATGATCCTTCAGACAAGTTCCACCTTCTAAGATTGTATGATTATTTCTATTATAGAGAACATTTGTTAATAGTATGTGAGTTGCTCAAAGCCAACCTATACGAGTTTCACAAATTTAATCGAGAATCAGGGGGGGAAGTTTATTTCACGATGCCAAGGTTGCAGTCAATCACCATTCAGTGTTTGGAGGCACTTCAGTTTTTGCATAGTCTTGGACTAATACATTGTGACTTGAAGCCAGAGAATATTTTGGTTAAAAGCTATAGCAGATGTGAAGTGAAGGTTATTGATCTCGGGAGTAGTTGTTTTGAGACAGATCACCTTTGCTCGTATGTTCAGTCCAGGTCTTATCGTGCTCCTGAGGTTATTTTGGGGCTTCCATATGACAAGAAGATTGATATCTGGTCACTTGGATGCATCTTGGCAGAACTTTGTACTGGCAACGTCCTCTTCCAAAATGATTCCCCTGCAACACTACTTGCTCGGGTGATCGGGATCATTGGCCCAGTTGATCAAAGTTTACTTGCCAAAGGACGGGATACATATAAATACTTCACAAAAAATCACATGCTTTATGAACGGAATCAGGAAAGCAACAGGTTAGAATACCTGATTCCAAAAAAGACATCATTGAGGCATAGATTACCGATGGGAGACCAAGGCTTCATCGACTTTGTTGCTCATTTGCTCGAGGTTAACCCAAAGAAGCGACCGTCTGCGTCTGAGGCCCTGAAGCACCCATGGTTATCATACCCTTATGAACCAATATCATCTTAA 3543 0.4149 MADTNSVEVILDFLRRNRFTRAEAALRSELSNCTDVNGFLQKLTLEEKDLRGGLQSDKGKPVVENHGLNSRDGVEVSKELIVKEIECGTGRNAAEESKWKTVAPTGERNKSSEVVGTSEKNFTFSKSSEDSVLDLYSWKFNPTNGPVEPYQNDSGSRPSNALKAPVSQQSKYQTGEVPAATNSNVKSGEGEVNSIPAEKTALWLGSSGRSSTEPKYDLMHNKEPKELDMQLNYNASSLKENLTDNHLSRTDENVNSSTDLWKDCSVKTVFPFSKGDMSTSYNGSTFSDRQEEKRRAENGDVMTSIKEQVDEVGRALYLGKLQGSSGSLNFPLDLENPKEEFPRLPPVKIKSEDKPLTFNWGDKFESDGLAVKLTGADNSFLIGSYLDVPIGQDIKTTGVRKSIGGSWLSVSQGISEDTSDLVSGFATIGDGLSESVDYPNEYWDSDEYDDDEDVGYMRQPIEDEAWFLAHEIDYPSDNEKGTGHGSVPDPQERSPAKDEEDDQSFAEEDSYFSGEQYILPKNVEPVTSDDPIGLTITEMYGRTNGNDIMTQYDTQLMDVEELNLMHIEPVRQGFVTHQNDLIMLGDGRVLNHGARPRIEDMEDDQHGSVRSIGVGINSDAADIGSEVHGSLIGGSSEGDLEYFRDHDTMHSGTKHTHQDLDKSFCNKSVKSNKKTDKNESNKYVIDSNKDACSQIKTHTDGNFSFPQSLRDGQMIQAGSSKSPWTSNGNVDETDDCLNAFAGSDDMLSSWRRKSSDSSPVKSSRDDNNALVVRSRNSSPTTVSNYGYTDGEHVKLEKDEKVSVVREDDIGASLEDEEAAAVQEQVRQIKAQEEEFETFNLKIVHRKNRTGFEEDKNFHVVLNSVLAGRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNKDFFDQSLDEIKLLKYVNKHDPSDKFHLLRLYDYFYYREHLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHSLGLIHCDLKPENILVKSYSRCEVKVIDLGSSCFETDHLCSYVQSRSYRAPEVILGLPYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPVDQSLLAKGRDTYKYFTKNHMLYERNQESNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEVNPKKRPSASEALKHPWLSYPYEPISS 1180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun4g00486 1180 PANTHER DUAL SPECIFICITY PROTEIN KINASE 408 1171 - -
Viun4g00486 1180 MobiDBLite consensus disorder prediction 144 192 - -
Viun4g00486 1180 Coils Coil 821 841 - -
Viun4g00486 1180 MobiDBLite consensus disorder prediction 752 787 - -
Viun4g00486 1180 MobiDBLite consensus disorder prediction 144 190 - -
Viun4g00486 1180 Pfam Protein kinase domain 869 1171 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun4g00486 1180 FunFam Putative serine/threonine-protein kinase dyrk2 863 950 - -
Viun4g00486 1180 Gene3D Transferase(Phosphotransferase) domain 1 923 1171 - -
Viun4g00486 1180 SUPERFAMILY Protein kinase-like (PK-like) 858 1173 IPR011009 -
Viun4g00486 1180 CDD PKc_DYRK_like 869 1171 - -
Viun4g00486 1180 Gene3D Phosphorylase Kinase; domain 1 863 950 - -
Viun4g00486 1180 ProSitePatterns Serine/Threonine protein kinases active-site signature. 995 1007 IPR008271 GO:0004672|GO:0006468
Viun4g00486 1180 MobiDBLite consensus disorder prediction 477 508 - -
Viun4g00486 1180 SMART serkin_6 869 1171 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun4g00486 1180 FunFam Serine/threonine-protein kinase ppk15 948 1172 - -
Viun4g00486 1180 ProSiteProfiles Protein kinase domain profile. 869 1171 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun4g00486 1180 MobiDBLite consensus disorder prediction 749 788 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun4g00486 Viun-Chr4 3194613 3202308 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun4g00486 868 1166 MAP Kinase Gene Family AT5G19010 31.034 1.92e-29 123
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_DYRK-PRP4 Viun4g00486 Pkinase 1.1e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun4g00486 - - gmx:100786225 2122.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g00018 3 69886 79377 Viun4g00486 4 3194613 3202308 PCT