Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun4g00468 ATGGATGGTGATAATGGTCTCAACATCCGTAACTGGGGTTACTATGAACCGGCCACATCGTTTAAGAGCCACCTGGGGCTGCAGCTGATGTCATCCATGCCGGAGAAGCCTTTAATCGGAGGGCGCAATGCTGCGGTTTTATCTGGCACAAATGGGGCATTTCACCACAGAGACATTGGTATGTCCCACGCTACATACCCTATGGATTACGTGAGGGATGCTTGGATTAGTAGTCAGAGAGACAAGTACATGAATATGATACCTACAAATCATAACTATGGTGGTATTCCGGAGACATCTTCGGCACATCAAATTCAAATGATTCCACCGCCGGAGTTGCCGAAGGAAGAAAGGGAAGTGGAAGAGGAACCTGTTGTTGAGAAGGTAACTGGGGGAACTCGTAAGAAAAGACAGAGCCCAAAGGTGCCGAAATCTCCCAAGGCTAAGAAGTCCAAGAGGGGACCTCGTGTGCCAAAGAATGAGAATGCTCCCACAGTTCATCGTGCAAGAGTTCCAAAGAAAACTACTGAAATTGTAATAAATGGAATTGACATGGATATTTCAAGTATTCCAATCCCTGTTTGTTCATGCACAGGAGCATCTCAACAGTGTTACAGATGGGGCTCTGGAGGGTGGCAATCTGCATGTTGCACAACAGGCATGTCAGTGTATCCTTTGCCTATGAGTACCAAGCGGCGTGGTGCAAGGATAGCTGGAAGGAAAATGAGTATAGGAGCGTTTAAGAAAGTTTTGGAGAAACTTGCTGCTGAGGGTTATAACTTTTCTAATCCTATTGATTTGAGGACTTATTGGGCAAAACATGGCACCAACAAGTTTGTCACTATTAGGTAG 852 0.4566 MDGDNGLNIRNWGYYEPATSFKSHLGLQLMSSMPEKPLIGGRNAAVLSGTNGAFHHRDIGMSHATYPMDYVRDAWISSQRDKYMNMIPTNHNYGGIPETSSAHQIQMIPPPELPKEEREVEEEPVVEKVTGGTRKKRQSPKVPKSPKAKKSKRGPRVPKNENAPTVHRARVPKKTTEIVINGIDMDISSIPIPVCSCTGASQQCYRWGSGGWQSACCTTGMSVYPLPMSTKRRGARIAGRKMSIGAFKKVLEKLAAEGYNFSNPIDLRTYWAKHGTNKFVTIR 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun4g00468 283 SMART GAGA_bind_2 1 283 IPR010409 -
Viun4g00468 283 MobiDBLite consensus disorder prediction 135 154 - -
Viun4g00468 283 MobiDBLite consensus disorder prediction 111 169 - -
Viun4g00468 283 PANTHER - 1 283 IPR010409 -
Viun4g00468 283 Pfam GAGA binding protein-like family 1 283 IPR010409 -
Viun4g00468 283 MobiDBLite consensus disorder prediction 112 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun4g00468 Viun-Chr4 3068711 3070556 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun4g00468 1 283 BBR or BPC Transcription factor family AT2G01930 51.678 9.21e-96 281
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BBR-BPC Viun4g00468 GAGA_bind 3.2e-110 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun4g00468 - - gmx:100784091 496.893