Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun4g00428 ATGGAATCTCAGACGCCTAACACTACTATTCACACCTACAAACAACTACAACAACAAGATCATGATGACGAGGAAGAAGCAGAAGAACAAAACAGTGAGATTCTCAAGAGAAGAATCTCCAGCCACCCTCTCTATGGACTGCTGCTTGAAGCTCACCTCGACTGTTTAAAGGTCGGTGAGATTTCCAAGTTGGAGAGAGAGGTGAAGATAGATGAGATGAAAGCAAGAGAGAAGCAAAAGTTGGACATGTTGAGTCAACCTGAGCTTGATCTCTTCATGGAAGCATATTGCTTGTCACTTGGGAAGCTTAAAGAAGCAATGGTGGAACCACAGCAGAAGTCCATGGCTTTCATAAACAACATGCATTCACAACTCAGAGAGATCACTGCACCATCTTCTGAACCTGCACCACCTTCTGCATCTTCTAGTCACTGCAATTTCACAACAAATTAG 453 0.4327 MESQTPNTTIHTYKQLQQQDHDDEEEAEEQNSEILKRRISSHPLYGLLLEAHLDCLKVGEISKLEREVKIDEMKAREKQKLDMLSQPELDLFMEAYCLSLGKLKEAMVEPQQKSMAFINNMHSQLREITAPSSEPAPPSASSSHCNFTTN 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun4g00428 150 MobiDBLite consensus disorder prediction 1 15 - -
Viun4g00428 150 MobiDBLite consensus disorder prediction 1 33 - -
Viun4g00428 150 Coils Coil 13 33 - -
Viun4g00428 150 Coils Coil 61 81 - -
Viun4g00428 150 MobiDBLite consensus disorder prediction 128 150 - -
Viun4g00428 150 SMART KNOX1_2 33 79 IPR005540 GO:0003677|GO:0005634
Viun4g00428 150 PANTHER HOMEOBOX PROTEIN KNOTTED-1-LIKE 6 ISOFORM X1 13 132 - -
Viun4g00428 150 SMART KNOX2_2 79 130 IPR005541 GO:0003677|GO:0005634
Viun4g00428 150 Pfam KNOX1 domain 35 59 IPR005540 GO:0003677|GO:0005634
Viun4g00428 150 Pfam KNOX2 domain 85 129 IPR005541 GO:0003677|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun4g00428 Viun-Chr4 2903309 2905582 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun4g00428 1 125 Homeobox Transcription Factor Family AT4G08150 32.353 3.76e-15 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun4g00428 - - gsj:114367439 188.734